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Pass GitHub token to setup-r-dependencies in r-hub workflow #1264

Pass GitHub token to setup-r-dependencies in r-hub workflow

Pass GitHub token to setup-r-dependencies in r-hub workflow #1264

Workflow file for this run

---
name: Check URLs 🌐
on:
push:
branches:
- main
pull_request:
types:
- opened
- synchronize
- reopened
- ready_for_review
branches:
- main
workflow_dispatch:
workflow_call:
inputs:
lychee-additional-args:
description: Additional arguments to pass to lychee
required: false
type: string
default: "--exclude-private"
lychee-fail:
description: Fail workflow run on error (i.e. when lychee exit code is not 0)
required: false
type: boolean
default: false
package-subdirectory:
description: Subdirectory in the repository, where the R package is located.
required: false
type: string
default: ""
link-checking-method:
description: |
Which link checking method should be used? Supported methods are:
lychee
urlchecker
required: false
type: string
default: "urlchecker"
concurrency:
group: links-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
links:
name: Validate Links 🔎
runs-on: ubuntu-latest
if: >
!contains(github.event.commits[0].message, '[skip links]')
&& github.event.pull_request.draft == false
&& inputs.link-checking-method == 'lychee'
steps:
- name: Get branch names 🌿
id: branch-name
uses: tj-actions/branch-names@v7
- name: Checkout repo (PR) 🛎
uses: actions/[email protected]
if: github.event_name == 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
repository: ${{ github.event.pull_request.head.repo.full_name }}
- name: Checkout repo 🛎
uses: actions/[email protected]
if: github.event_name != 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
- name: Check commit message 💬
run: |
git config --global --add safe.directory $(pwd)
export head_commit_message="$(git show -s --format=%B | tr '\r\n' ' ' | tr '\n' ' ')"
echo "head_commit_message = $head_commit_message"
if [[ $head_commit_message == *"$SKIP_INSTRUCTION"* ]]; then
echo "Skip instruction detected - cancelling the workflow."
exit 1
fi
shell: bash
env:
SKIP_INSTRUCTION: "[skip links]"
- name: Check URLs in docs 🔬
uses: lycheeverse/[email protected]
with:
args: >-
--exclude "https://github.com.*.git|https://insightsengineering.github.io.*|lewagon.*|knightdave.*|.*users.noreply.github.com|lycheeverse.*"
--verbose
--no-progress
${{ inputs.lychee-additional-args }}
**/*.md
**/*.html
**/*.Rmd
**/*.yaml
**/*.yml
*.md
fail: ${{ inputs.lychee-fail }}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
urlchecker:
name: URL Checker 🔎
runs-on: ubuntu-latest
container:
image: rocker/tidyverse:latest
if: >
!contains(github.event.commits[0].message, '[skip links]')
&& github.event.pull_request.draft == false
&& inputs.link-checking-method == 'urlchecker'
steps:
- name: Get branch names 🌿
id: branch-name
uses: tj-actions/branch-names@v7
- name: Checkout repo (PR) 🛎
uses: actions/[email protected]
if: github.event_name == 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
repository: ${{ github.event.pull_request.head.repo.full_name }}
- name: Checkout repo 🛎
uses: actions/[email protected]
if: github.event_name != 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
- name: Check commit message 💬
run: |
git config --global --add safe.directory $(pwd)
export head_commit_message="$(git show -s --format=%B | tr '\r\n' ' ' | tr '\n' ' ')"
echo "head_commit_message = $head_commit_message"
if [[ $head_commit_message == *"$SKIP_INSTRUCTION"* ]]; then
echo "Skip instruction detected - cancelling the workflow."
exit 1
fi
shell: bash
env:
SKIP_INSTRUCTION: "[skip links]"
- name: Check URLs with urlchecker 🔬
run: |
# For unexplained reasons, parallel = FALSE is required to prevent some false positives.
bad_urls <- nrow(print(urlchecker::url_check(".", parallel = FALSE)))
if (bad_urls > 0) {
stop("Looks like a total of ", bad_urls, " URL(s) were found! Please correct them.")
}
shell: Rscript {0}
working-directory: ${{ inputs.package-subdirectory }}