Add latest tags of packages and make release notes

iLCSoft · Dec 21, 2022 · 862f5e1 · 862f5e1
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diff --git a/doc/release_notes_ilcsoft_v02-03-01.md b/doc/release_notes_ilcsoft_v02-03-01.md
@@ -11,6 +11,16 @@ None
 
 ## Packages changed wrt. v02-02-01
 
+### LCIO v02-19
+
+* 2022-12-11 Frank Gaede ([PR#158](https://github.com/iLCSoft/LCIO/pull/158))
+  - add utility class `CheckCollections` that allows to parse lcio files for collections that are not present in every event and to patch such events with empty collections of the given (Name,Type) for further processing
+  - add example tool `check_missing_cols` that checks for collections that are not in every event in a set of files and prints a summary to stdout:
+       - `usage:  check_missing_cols <input-file1> [[input-file2],...]`
+  - add example tool `patch_missing_cols` that creates a copy of the input file with the same set of collections in all events:
+      -  ` usage:  patch_missing_cols <input-file> <output-file> ` 
+  - these tools are needed in cases where code expects consistent sets of collections in every event, as for example in a conversion to `EDM4hep`
+
 ### LCIO v02-18
 
 * 2022-11-08 Thomas Madlener ([PR#155](https://github.com/iLCSoft/LCIO/pull/155))
@@ -31,4 +41,229 @@ None
   - Added a utility function to get an index of a provided object inside a given LCCollection
   - Added a utility function to return a leading track from ReconstructedParticle in case it has multiple tracks attached.
 
+### ILCUTIL v01-07
+
+* 2022-12-02 Thomas Madlener ([PR#26](https://github.com/iLCSoft/ILCUTIL/pull/26))
+  - Remove obsolete gcc8 based workflow and update github actions versions
+
+* 2022-12-02 Thomas Madlener ([PR#25](https://github.com/iLCSoft/ILCUTIL/pull/25))
+  - Disable `USE_CXX11` by default since we switched to c++17 quite some time ago and this option needs to be manually disabled in order to make that work via `CMAKE_CXX_STANDARD`.
+
+### Marlin v01-19
+
+* 2022-12-12 Frank Gaede ([PR#49](https://github.com/iLCSoft/Marlin/pull/49))
+  - Add a simple processor `PatchCollections` that can patch missing collections in LCIO events by adding empty collections to these events
+  -  needs https://github.com/iLCSoft/LCIO/pull/158
+
+* 2022-12-09 Thomas Madlener ([PR#50](https://github.com/iLCSoft/Marlin/pull/50))
+  - Add a CI workflow that runs on the latest key4hep nightly builds.
+
+### Marlin v01-18
+
+* 2022-11-23 Thomas Madlener ([PR#47](https://github.com/ilcsoft/Marlin/pull/47))
+  - Add a `MarlinWrapperPrivateAccessor` class that allows the `MarlinProcessorWrapper` to access private methods by constructing such a class on the fly, when necessary.
+
+* 2022-11-16 Thomas Madlener ([PR#48](https://github.com/ilcsoft/Marlin/pull/48))
+  - Remove no longer working gcc8 based CI workflow and update github actions to latest available versions
+
+* 2022-09-19 Bohdan Dudar ([PR#45](https://github.com/ilcsoft/Marlin/pull/45))
+  - Fix #43, a bug where xml comment fields were processed as a legitimate values and shadowed any data that comes after the comment.
+
+* 2022-09-15 Thomas Madlener ([PR#46](https://github.com/ilcsoft/Marlin/pull/46))
+  - Migrate to github actions CI workflows and remove travis CI configuration
+
+### MarlinUtil v01-17
+
+* 2022-11-14 Thomas Madlener ([PR#35](https://github.com/iLCSoft/MarlinUtil/pull/35))
+  - Remove the no longer supported gcc8 based CI workflow.
+
+* 2022-10-20 Thomas Madlener ([PR#31](https://github.com/iLCSoft/MarlinUtil/pull/31))
+  - Adding a basic Catch2 v3 based unittest setup that can be used to easily add unittests.
+    - The CMake configuration allows to either build Catch2 on the fly or to discover a suitable installation of Catch2
+  - Add the existing test and an example unittest to the test suit that can be run via `ctest` after building the package.
+  - Disable building the tests for the coverity workflow for now to avoid polluting the output of that with Catch2 issues
+
+* 2022-10-19 Thomas Madlener ([PR#33](https://github.com/iLCSoft/MarlinUtil/pull/33))
+  - Make sure that `.ipp` files are also installed. Necessary since #30, fixes #32
+
+* 2022-10-19 Thomas Madlener ([PR#30](https://github.com/iLCSoft/MarlinUtil/pull/30))
+  - Introduce a `HelixClassT` template class and make `HelixClass` and `HellixClass_double` typedefs of this class, instead of having two separate (but practically identical) implementations that are in place currently.
+    - Explicitly instantiate both versions that were in place previously to make sure things don't break downstream.
+    - Mark getters as `const`
+
+* 2022-09-19 Carl Mikael Berggren ([PR#28](https://github.com/iLCSoft/MarlinUtil/pull/28))
+  The header-file has been re-organised and heavily
+  commented - should work as a manual.
+
+  Bug fix: a missing factor of two in propagateValErrors , the errors
+  on the eigen-values (= the error on the estimated variances)
+
+  New public methods:
+
+  getElipsoid_r1 (_r2, _r3)
+  getElipsoid_r1Error (_r2, _r3)
+  getElipsoid_r_ave
+  * getElipsoid_r_forw (_back)
+  getElipsoid_vol
+  getElipsoid_density
+  getLongitudinalElipsis_eccentricity
+  getTransverseElipsis_eccentricity
+  * getMaxDist
+  * getElipsoid_FractionInside
+
+  Transformations:
+
+  TransformPointToEigenSyst
+  * TransformToEigenSyst
+  * TransformAlongDirection (2 versions)
+
+  (The ones with a * in front are only useful with Reco-input, since
+   they need to have access to the CaloHits)
+  getters of transformed properties:
+
+  * get_x_trans (_y_, _z_)
+  * get_COG_trans
+  * get_COGCov_trans
+  * get_th_ref
+  * get_ph_ref
+  * get_xyz_ref
+
+  New private methods:
+
+  findMaxDist
+  findFirstAndLast
+  findElipsoid_FractionInside
+
+  Symbols defined: _one_sigma, _CL90, _CL95, _CL99
+
+### MarlinTrkProcessors v02-12-02
+
+* 2022-11-23 Thomas Madlener ([PR#62](https://github.com/iLCSoft/MarlinTrkProcessors/pull/62))
+  - Make sure that the `_histos` pointer is at least initialized to a `nullptr` to avoid a spurious seg fault when trying to delete it uninitialized.
+
+### KiTrackMarlin v01-13-02
+
+* 2022-12-02 Thomas Madlener ([PR#8](https://github.com/iLCSoft/KiTrackMarlin/pull/8))
+  - Remove the deprecate gcc8 based CI build, and update github actions to the latest available versions.
+
+* 2022-12-02 Valentin Volkl ([PR#7](https://github.com/iLCSoft/KiTrackMarlin/pull/7))
+  - cmake: exclude Linux-only "Timer" to fix build on macos
+
+### MarlinDD4hep v00-06-02
+
+* 2022-12-02 Thomas Madlener ([PR#10](https://github.com/iLCSoft/MarlinDD4hep/pull/10))
+  - Remove the obsolete gcc8 based workflow and update github actions to latest available versions.
+
+* 2022-12-02 Bohdan Dudar ([PR#9](https://github.com/iLCSoft/MarlinDD4hep/pull/9))
+  - Verbosity levels now correspondingly control DD4hep printouts
+
+### MarlinReco v01-33-01
+
+* 2022-12-06 Thomas Madlener ([PR#107](https://github.com/ilcsoft/MarlinReco/pull/107))
+  - Remove no longer available CI workflow based on gcc8 since the underlying nightly builds are no longer available
+  - Update github actions to latest available versions
+
+* 2022-12-06 Bohdan Dudar ([PR#106](https://github.com/ilcsoft/MarlinReco/pull/106))
+  - Fix a seg. fault, in rare cases, when the track fit fails in both directions due to the lack of hits.
+
+### lcgeo v00-18
+
+* 2022-12-02 Daniel Jeans ([PR#261](https://github.com/ilcsoft/lcgeo/pull/261))
+  - bug fix: no longer carry over energy to next event (sometimes affected lowpt hits)
+  - address one FIXME: create highpt hits even if steps have not passed the padrow centre
+  - some slight code cleanup and reorganisation to hopefully make it clearer to read
+
+* 2022-11-07 Thomas Madlener ([PR#260](https://github.com/ilcsoft/lcgeo/pull/260))
+  - Remove gcc8 based workflow because the underlying nightly builds are no longer available
+  - Update github actions to latest available versions.
+
+* 2022-11-07 Daniel Jeans ([PR#250](https://github.com/ilcsoft/lcgeo/pull/250))
+  - ILD_l5[_o1,2,3,4]_v09 models with CLIC-inspired all silicon outer tracker in place of TPC+SET
+  - otherwise identical to ILD_l5_v02 model
+
+### ILDPerformance v01-11
+
+* 2022-12-09 Ulrich Einhaus ([PR#38](https://github.com/iLCSoft/ILDPerformance/pull/38))
+  add option to use RecoMCTruthLink instead of Trak2MCTruthLink
+    add plots and fits for angular correction and Bethe-Bloch reference curve for LikelihoodPIDProcessor
+    add command line output and text file output of above fit results for calibration
+
+* 2022-11-14 Thomas Madlener ([PR#37](https://github.com/iLCSoft/ILDPerformance/pull/37))
+  - Update CI to latest working nightly builds and use the same actions as everywhere else.
+
+* 2022-11-14 Zehvogel ([PR#36](https://github.com/iLCSoft/ILDPerformance/pull/36))
+  - fixed memory leak in PIDTree.cc
+
+### podio v00-16-01
+
+* 2022-12-06 jmcarcell ([PR#356](https://github.com/AIDASoft/podio/pull/356))
+  - Fix path in the README
+  - Use the functionality in argparse to choose between options
+
+* 2022-12-06 Benedikt Hegner ([PR#346](https://github.com/AIDASoft/podio/pull/346))
+  - Switched tp Apache 2.0 license to facilitate integration in experiment stacks.
+
+* 2022-12-05 Thomas Madlener ([PR#357](https://github.com/AIDASoft/podio/pull/357))
+  - Put `<prefix>/bin` onto `PATH` in order to make `podio-dump` available from environments created with `env.sh`
+
+* 2022-12-02 jmcarcell ([PR#354](https://github.com/AIDASoft/podio/pull/354))
+  - Make `env.sh` setup script POSIX compliant to run in shells other than bash
+    - Change `==` to `=`
+    - Change tabs to spaces (two) to avoid mix of spaces and tabs for indenting
+    - Add `<prefix>/include` to `ROOT_INCLUDE_PATH` (as it is required since #343)
+
+* 2022-11-16 Thomas Madlener ([PR#351](https://github.com/AIDASoft/podio/pull/351))
+  -  Fix bug in Frame python bindings where empty collections were considered as non-existing. Replacing the original check relying on some implicit boolean conversions (which also caught empty collections) to an explicit check against `nullptr`.
+  - Make `podio-dump` more robust in installations without SIO support, by guarding the corresponding import.
+
+* 2022-11-14 Thomas Madlener ([PR#344](https://github.com/AIDASoft/podio/pull/344))
+  - Make `podio-dump` work with new Frame based I/O (fixes #339)
+  - Keep existing functionality intact by using the legacy readers introduced in #345.
+
+* 2022-11-11 Thomas Madlener ([PR#345](https://github.com/AIDASoft/podio/pull/345))
+  - Add a `ROOTLegacyReader` and a `SIOLegacyReader` that read files that have been written prior to #287 into `podio::Frame`s and offers the same interface as the frame readers
+    - Also including python bindings for it
+
+* 2022-11-10 Thomas Madlener ([PR#349](https://github.com/AIDASoft/podio/pull/349))
+  - Fix bug in setting relations in nested get calls in `podio::Frame`. Fixes #348 
+  - Adapt the read test to actually check this. Previously this went unnoticed, because the necessary relations were already set in a previous call.
+
+* 2022-11-10 Thomas Madlener ([PR#343](https://github.com/AIDASoft/podio/pull/343))
+  - Add python bindings for `Frame` based I/O
+    - Available from `podio.root_io` and `podio.sio_io`, where a `Reader` and a `Writer` is implemented for each.
+    - Wrapper around `podio::Frame`. **Requires that the `podio/Frame.h` header is available somewhere on the `ROOT_INCLUDE_PATH`**.
+  - Add necessary functionality for python bindings to C++ API
+    - untyped `Frame::get` method for getting collections
+    - New constructor from `FrameDataT&&`
+    - functionality to inspect file and `Frame` contents more easily
+  - Reorganize python code into structure that follows the usual python packaging conventions a bit more closely
+    - Introduce the `podio` module. Make CMake generate the `__init__.py` with the correct version
+    - Move everything except the generator script into `module`. Additionally also keep an `EventStore` wrapper to not break existing code. 
+  - Refactor the `CMakeLists.txt` that is responsible for building the core and all required I/O libraries
+    - Build more dictionaries for more python bindings.
+
+* 2022-11-02 Thomas Madlener ([PR#342](https://github.com/AIDASoft/podio/pull/342))
+  - Migrate to `actions/checkout@v3` as advised by [github](https://github.blog/changelog/2022-09-22-github-actions-all-actions-will-begin-running-on-node16-instead-of-node12/)
+  - Use the checkout action to clone the dependencies in the edm4hep workflow instead of doing an explicit clone in the body of the action
+
+* 2022-11-02 Dmitry Kalinkin ([PR#327](https://github.com/AIDASoft/podio/pull/327))
+  - fix typo in documentation
+
+* 2022-10-24 Juraj Smiesko ([PR#340](https://github.com/AIDASoft/podio/pull/340))
+  - Adding reading of specific entry from frame
+
+* 2022-10-21 Thomas Madlener ([PR#335](https://github.com/AIDASoft/podio/pull/335))
+  - Update the `github-action-cvmfs` and `run-lcg-view` actions to their latest available version to pick up the latest improvements (caching of dependencies, log groups)
+  - Introduce log groups in github actions for easier to interpret outputs
+  - Switch to LCG_102 for lcg based build environments
+  - Add a workflow that builds and tests EDM4hep after building podio
+
+### EDM4hep v00-07-02
+
+* 2022-11-29 Thomas Madlener ([PR#186](https://github.com/key4hep/EDM4hep/pull/186))
+  - Use agreed upon spelling of lower case "hep" on doxygen ref page header.
 
+* 2022-11-15 Thomas Madlener ([PR#185](https://github.com/key4hep/EDM4hep/pull/185))
+  - Only build JSON support if a suitable version of nlohmann/json is found. This should fix a few issues in CI.
+  - Fix formatting of `edm4hep2json`.
+  - Update versions of github actions used in CI to latest available.
diff --git a/releases/v02-03/release-versions.py b/releases/v02-03/release-versions.py
@@ -8,7 +8,7 @@
 ###########################################
 
 # --------- ilcsoft release version ------------------------------------------
-ilcsoft_release = 'v02-03'
+ilcsoft_release = 'v02-03-01'
 # ----------------------------------------------------------------------------
 
 # which cxx standard to use
@@ -138,7 +138,7 @@
 
 CondDBMySQL_version = "CondDBMySQL_ILC-0-9-7"
 
-ILCUTIL_version = "v01-06-02"
+ILCUTIL_version = "v01-07"
 
 FastJet_version = "3.4.0"
 
@@ -150,7 +150,7 @@
 
 # -------------------------------------------
 
-LCIO_version = "v02-18"
+LCIO_version = "v02-19"
 
 GEAR_version = "v01-09-01"
 
@@ -166,13 +166,13 @@
 
 MarlinTrk_version = "v02-09-01"
 
-MarlinTrkProcessors_version = "v02-12-01"
+MarlinTrkProcessors_version = "v02-12-02"
 
 Clupatra_version = "v01-03"
 
 KiTrack_version = "v01-10"
 
-KiTrackMarlin_version = "v01-13-01"
+KiTrackMarlin_version = "v01-13-02"
 
 ForwardTracking_version = "v01-14-01"
 
@@ -186,19 +186,19 @@
 
 RAIDA_version = "v01-09"
 
-MarlinUtil_version = "v01-16-02"
+MarlinUtil_version = "v01-17"
 
-Marlin_version = "v01-17-01"
+Marlin_version = "v01-19"
 
-MarlinDD4hep_version = "v00-06-01"
+MarlinDD4hep_version = "v00-06-02"
 
 DDMarlinPandora_version = "v00-12"
 
-MarlinReco_version = "v01-33"
+MarlinReco_version = "v01-33-01"
 
 FCalClusterer_version = "v01-00-03"
 
-ILDPerformance_version = "v01-10"
+ILDPerformance_version = "v01-11"
 
 # ILDConfig_version = "v02-03"
 
@@ -234,10 +234,10 @@
 
 DD4hepExamples_version = "v01-20-02"
 
-lcgeo_version = "v00-16-08"
+lcgeo_version = "v00-18"
 
-podio_version = "v00-14-03"
+podio_version = "v00-16-01"
 
-edm4hep_version = "v00-05"
+edm4hep_version = "v00-07-02"
 
 Physsim_version = "v00-04-02"