Update for dependencies removing deprecations...

python-tools/hlb/parsers/extraction.py

@@ -289,7 +289,7 @@ def _DetermineTimes(self):
             times[iT] = xdrlib.Unpacker(timeBuf).unpack_uhyper()
             continue
 
-        assert np.alltrue(
+        assert np.all(
             np.argsort(times) == np.arange(len(times))
         ), "Times in extraction file are not monotonically increasing!"
         self.times = times

python-tools/hlb/parsers/geometry/BaseSite.pyx

@@ -28,7 +28,7 @@ cdef public enum:
     WALL_NORMAL_AVAILABLE = 1
 
 cdef class BaseSite:
-    def __init__(self, block, np.ndarray[np.int_t] sgIdx):
+    def __init__(self, block, np.ndarray[np.int64_t] sgIdx):
         self.GetBlock = weakref.ref(block)
         self.Index = sgIdx
         self.IntersectionType = None

python-tools/hlb/parsers/geometry/generic.py

@@ -21,7 +21,7 @@ def __init__(self, shape):
         """shape is the number of elements along each dimension of the
         array."""
 
-        self.shape = np.array(shape).squeeze()
+        self.shape = np.array(shape, dtype=int).squeeze()
         self.ndim = len(self.shape)
         self._conv = np.array(
             [np.prod(self.shape[i:]) for i in range(1, self.ndim + 1)], dtype=int

python-tools/tox.ini

@@ -1,14 +1,13 @@
 [tox]
-envlist = py36,py37,py38,py39,py10
+envlist = py38,py39,py310,py311
 isolated_build = true
 
 [gh-actions]
 python =
-    3.6: py36
-    3.7: py37
     3.8: py38
     3.9: py39
     3.10: py310
+    3.11: py311
 
 [testenv]
 deps = -rtest-requirements.txt