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v0.3.18
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@hartleys hartleys released this 05 Oct 18:26
· 27 commits to master since this release
v0.3.18
1744808

Added minor gff tags in the flattened gff file, listing the set of transcripts for each gene and their strand. This should not affect any analysis, but will be optionally used by the next JunctionSeq release.

Note that the new recommended way to install the QoRTs R package is to use the R command:

install.packages("http://hartleys.github.io/QoRTs/QoRTs_LATEST.tar.gz",
                   repos=NULL, 
                   type="source");

Thus, most people will only need to directly download the QoRTs.jar file linked below.

The JAR utility (as always) does not need to be installed. It is invoked directly:

java -jar /path/to/jarfile/QoRTs.jar QC input.bam anno.gtf.gz /output/dir/
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