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Xiuqi's Scripts for Regulatory Genome analysis.

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RegGenome_script_lib

Scripts for Regulatory Genome analysis.

Testing

Before running tests, sample data of large size should be placed under large_sample_data/.

  • hg38.fa: UCSC hg38 reference genome.

Test scripts are under tests/. Use the following command to run test for each scripts.

SCRIPT=#test script to run
python -m unittest ${SCRIPT}

Scripts

For detailed input/output of each script, please use the --help flag for each script.

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  • Python 100.0%