latex: add diff file

[ci skip]

This build is based on
3df517f.

This commit was created by the following CI build and job:
https://github.com/greenelab/manubot-gpt-manuscript/commit/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/checks
https://github.com/greenelab/manubot-gpt-manuscript/actions/runs/9202493901

README.md

@@ -1,7 +1,7 @@
 # Output directory containing the formatted manuscript
 
 The [`gh-pages`](https://github.com/greenelab/manubot-gpt-manuscript/tree/gh-pages) branch hosts the contents of this directory at <https://greenelab.github.io/manubot-gpt-manuscript/>.
-The permalink for this webpage version is <https://greenelab.github.io/manubot-gpt-manuscript/v/d0aabcf60df2b02925ff2d8b8422dd9747662f83/>.
+The permalink for this webpage version is <https://greenelab.github.io/manubot-gpt-manuscript/v/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/>.
 To redirect to the permalink for the latest manuscript version at anytime, use the link <https://greenelab.github.io/manubot-gpt-manuscript/v/freeze/>.
 
 ## Files
@@ -35,4 +35,4 @@ Verifying timestamps with the `ots verify` command requires running a local bitc
 ## Source
 
 The manuscripts in this directory were built from
-[`d0aabcf60df2b02925ff2d8b8422dd9747662f83`](https://github.com/greenelab/manubot-gpt-manuscript/commit/d0aabcf60df2b02925ff2d8b8422dd9747662f83).
+[`3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b`](https://github.com/greenelab/manubot-gpt-manuscript/commit/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b).

index.html

@@ -54,8 +54,8 @@
   <meta name="dc.date" content="2024-05-23" />
   <meta name="citation_publication_date" content="2024-05-23" />
   <meta property="article:published_time" content="2024-05-23" />
-  <meta name="dc.modified" content="2024-05-23T04:39:16+00:00" />
-  <meta property="article:modified_time" content="2024-05-23T04:39:16+00:00" />
+  <meta name="dc.modified" content="2024-05-23T05:05:24+00:00" />
+  <meta property="article:modified_time" content="2024-05-23T05:05:24+00:00" />
   <meta name="dc.language" content="en-US" />
   <meta name="citation_language" content="en-US" />
   <meta name="dc.relation.ispartof" content="Manubot" />
@@ -78,9 +78,9 @@
   <meta name="citation_fulltext_html_url" content="https://greenelab.github.io/manubot-gpt-manuscript/" />
   <meta name="citation_pdf_url" content="https://greenelab.github.io/manubot-gpt-manuscript/manuscript.pdf" />
   <link rel="alternate" type="application/pdf" href="https://greenelab.github.io/manubot-gpt-manuscript/manuscript.pdf" />
-  <link rel="alternate" type="text/html" href="https://greenelab.github.io/manubot-gpt-manuscript/v/d0aabcf60df2b02925ff2d8b8422dd9747662f83/" />
-  <meta name="manubot_html_url_versioned" content="https://greenelab.github.io/manubot-gpt-manuscript/v/d0aabcf60df2b02925ff2d8b8422dd9747662f83/" />
-  <meta name="manubot_pdf_url_versioned" content="https://greenelab.github.io/manubot-gpt-manuscript/v/d0aabcf60df2b02925ff2d8b8422dd9747662f83/manuscript.pdf" />
+  <link rel="alternate" type="text/html" href="https://greenelab.github.io/manubot-gpt-manuscript/v/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/" />
+  <meta name="manubot_html_url_versioned" content="https://greenelab.github.io/manubot-gpt-manuscript/v/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/" />
+  <meta name="manubot_pdf_url_versioned" content="https://greenelab.github.io/manubot-gpt-manuscript/v/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/manuscript.pdf" />
   <meta property="og:type" content="article" />
   <meta property="twitter:card" content="summary_large_image" />
   <link rel="icon" type="image/png" sizes="192x192" href="https://manubot.org/favicon-192x192.png" />
@@ -98,9 +98,9 @@ <h1 class="title">A publishing infrastructure for AI-assisted academic authoring
 <p><em>A DOI-citable version of this manuscript is available at <a href="https://doi.org/10.1101/2023.01.21.525030" class="uri">https://doi.org/10.1101/2023.01.21.525030</a></em>.</p>
 <p><small><em>
 This manuscript
-(<a href="https://greenelab.github.io/manubot-gpt-manuscript/v/d0aabcf60df2b02925ff2d8b8422dd9747662f83/">permalink</a>)
+(<a href="https://greenelab.github.io/manubot-gpt-manuscript/v/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b/">permalink</a>)
 was automatically generated
-from <a href="https://github.com/greenelab/manubot-gpt-manuscript/tree/d0aabcf60df2b02925ff2d8b8422dd9747662f83">greenelab/manubot-gpt-manuscript@d0aabcf</a>
+from <a href="https://github.com/greenelab/manubot-gpt-manuscript/tree/3df517f3c6d4b6c7e6cc33eb285f66bec5d4432b">greenelab/manubot-gpt-manuscript@3df517f</a>
 on May 23, 2024.
 </em></small></p>
 <h2 id="authors">Authors</h2>