Test #368
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name: Test | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
on: | |
# Trigger on pull requests. | |
pull_request: | |
# Trigger on pushes to the mainline branches. This prevents building commits twice when the pull | |
# request source branch is in the same repository. | |
push: | |
branches: | |
- "master" | |
- "next" | |
# Trigger on request. | |
workflow_dispatch: | |
# Weekly builds on the master branch to check that the examples continue to work. | |
schedule: | |
- cron: '0 18 * * 1' | |
jobs: | |
execute_notebooks: | |
name: Execute notebooks, Python ${{ matrix.python-version }} | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ["3.9", "3.10"] | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/[email protected] | |
with: | |
path: freud-examples | |
# Important! All steps that use the conda environment should define "shell: bash -l {0}". | |
- uses: conda-incubator/setup-miniconda@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
mamba-version: "*" | |
channel-priority: strict | |
activate-environment: freud-examples | |
environment-file: freud-examples/environment.yml | |
- name: Prepare conda environment | |
shell: bash -l {0} | |
run: |- | |
# Remove freud so it can be built from source | |
mamba uninstall freud | |
# Install build requirements for freud | |
mamba install gcc_linux-64 gxx_linux-64 tbb tbb-devel numpy cython scikit-build cmake ninja | |
# Install testing requirements | |
mamba install pytest nbval | |
# Build freud from source to test the examples on the latest version | |
- uses: actions/[email protected] | |
with: | |
path: freud | |
ref: main | |
repository: glotzerlab/freud | |
submodules: true | |
- name: Install freud | |
shell: bash -l {0} | |
run: |- | |
which python3 | |
python3 -c "import sys; print(sys.version); print(sys.path)" | |
python3 -m pip install . | |
working-directory: freud | |
- name: Display freud version | |
shell: bash -l {0} | |
run: |- | |
python3 -c "import freud; print(freud.__version__)" | |
# clone the tutorials and run them | |
- name: List notebooks | |
run: ls **/*.ipynb | |
working-directory: freud-examples | |
- name: Run notebook execution tests | |
shell: bash -l {0} | |
run: |- | |
python3 -m pytest -v --nbval --nbval-lax --ignore=archive/ | |
working-directory: freud-examples | |
# notify developers if the scheduled check fails | |
- name: Slack notification | |
if: ${{ github.event_name == 'schedule' && (failure() || cancelled()) }} | |
uses: 8398a7/[email protected] | |
with: | |
status: ${{ job.status }} | |
fields: workflow,job,message,commit | |
mention: channel | |
if_mention: failure,cancelled | |
channel: '#dev-freud' | |
username: Github Action | |
author_name: '' | |
job_name: Execute notebooks | |
env: | |
SLACK_WEBHOOK_URL: ${{ secrets.SLACK_WEBHOOK_URL }} |