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tools_cram_to_bam.cwl

Travis CI User edited this page Jan 5, 2021 · 5 revisions

Documentation for cram_to_bam.cwl

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Overview

samtools view cram to bam

Docker Requirement

quay.io/biocontainers/samtools:1.11--h6270b1f_0

Inputs

Name Label Description Type Secondary Files
reference ['string', 'File'] ['.fai', '^.dict']
cram File ['^.crai']

Outputs

Name Label Description Type Secondary Files
bam File
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