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Merge branch 'master' into balhoff-patch-2
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@balhoff
balhoff committed Dec 14, 2023
2 parents 7510696 + cf8ada5 commit ce6a6c6
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Showing 2 changed files with 14 additions and 14 deletions.
22 changes: 11 additions & 11 deletions shapes/go-cam-shapes.shex
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Expand Up @@ -62,7 +62,7 @@ PREFIX GoTransporterActivity: <http://purl.obolibrary.org/obo/GO_0005215>
PREFIX GoChemicalEntity: <http://purl.obolibrary.org/obo/CHEBI_24431>
PREFIX GoEvidence: <http://purl.obolibrary.org/obo/ECO_0000000>
PREFIX GoAnatomicalEntity: <http://purl.obolibrary.org/obo/CARO_0000000>
PREFIX GoNativeCell: <http://purl.obolibrary.org/obo/CL_0000003>
PREFIX GoCell: <http://purl.obolibrary.org/obo/CL_0000000>
PREFIX GoOrganism: <http://purl.obolibrary.org/obo/NCBITaxon_1>
PREFIX GoBiologicalPhase: <http://purl.obolibrary.org/obo/GO_0044848>
PREFIX GoLifeCycleStage: <http://purl.obolibrary.org/obo/UBERON_0000105>
Expand Down Expand Up @@ -241,7 +241,7 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>

<CellDifferentiation> @<BiologicalProcess> AND EXTRA a {
a @<CellDifferentiationClass> {1};
results_in_acquisition_of_features_of: @<NativeCell> {0,1};
results_in_acquisition_of_features_of: @<Cell> {0,1};
} // rdfs:comment "a cell differentiation GO biological process or child"

<CellDivisionClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
Expand All @@ -250,7 +250,7 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>

<CellDivision> @<BiologicalProcess> AND EXTRA a {
a @<CellDivisionClass> {1};
has_input: @<NativeCell> {0,1};
has_input: @<Cell> {0,1};
} // rdfs:comment "a cell division GO biological process or child"

<CellFateCommitmentClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
Expand All @@ -259,7 +259,7 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>

<CellFateCommitment> @<BiologicalProcess> AND EXTRA a {
a @<CellFateCommitmentClass> {1};
results_in_commitment_to: @<NativeCell> {0,1};
results_in_commitment_to: @<Cell> {0,1};
} // rdfs:comment "a cell fate commitment GO biological process or child"

<CellFateDeterminationClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
Expand All @@ -268,7 +268,7 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>

<CellFateDetermination> @<BiologicalProcess> AND EXTRA a {
a @<CellFateDeterminationClass> {1};
results_in_determination_of: @<NativeCell> {0,1};
results_in_determination_of: @<Cell> {0,1};
} // rdfs:comment "a cell fate determination GO biological process or child"

<CellFateSpecificationClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
Expand All @@ -277,7 +277,7 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>

<CellFateSpecification> @<BiologicalProcess> AND EXTRA a {
a @<CellFateSpecificationClass> {1};
results_in_specification_of: @<NativeCell> {0,1};
results_in_specification_of: @<Cell> {0,1};
} // rdfs:comment "a cell fate specification GO biological process or child"

<CellularComponentAssemblyClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
Expand Down Expand Up @@ -488,14 +488,14 @@ PREFIX results_in_remodeling_of: <http://purl.obolibrary.org/obo/RO_0002591>
location_of: ( @<InformationBiomacromolecule> OR @<ProteinContainingComplex> ) {0,1};
} // rdfs:comment "an anatomical entity"

<NativeCellClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
rdfs:subClassOf [ GoNativeCell: ];
<CellClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
rdfs:subClassOf [ GoCell: ];
}

<NativeCell> @<GoCamEntity> AND EXTRA a {
a @<NativeCellClass> {1};
<Cell> @<GoCamEntity> AND EXTRA a {
a @<CellClass> {1};
part_of: @<AnatomicalEntity> {0,1};
} // rdfs:comment "a native cell or child"
} // rdfs:comment "a cell or child"

<CellularComponentClass> IRI @<OwlClass> AND EXTRA rdfs:subClassOf {
rdfs:subClassOf [ GoCellularComponent: ];
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6 changes: 3 additions & 3 deletions test_ttl/go_cams/should_pass/Test027-has_input_2_MolecularEntity.ttl
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Expand Up @@ -157,8 +157,8 @@ owl:versionInfo rdf:type owl:AnnotationProperty .
<http://purl.obolibrary.org/obo/CHEBI_4705> rdf:type owl:Class .


### http://purl.obolibrary.org/obo/CHEBI_60579
<http://purl.obolibrary.org/obo/CHEBI_60579> rdf:type owl:Class .
### http://purl.obolibrary.org/obo/CHEBI_30623
<http://purl.obolibrary.org/obo/CHEBI_30623> rdf:type owl:Class .


### http://purl.obolibrary.org/obo/ECO_0000314
Expand Down Expand Up @@ -467,7 +467,7 @@ owl:versionInfo rdf:type owl:AnnotationProperty .

### http://model.geneontology.org/5d27d1cf00000607/5d27d1cf00000626
<http://model.geneontology.org/5d27d1cf00000607/5d27d1cf00000626> rdf:type owl:NamedIndividual ,
<http://purl.obolibrary.org/obo/CHEBI_60579> ;
<http://purl.obolibrary.org/obo/CHEBI_30623> ;
<http://purl.org/dc/elements/1.1/contributor> "http://orcid.org/0000-0003-1813-6857"^^xsd:string ;
<http://purl.org/dc/elements/1.1/date> "2019-07-12"^^xsd:string ;
<http://purl.org/pav/providedBy> "http://geneontology.org"^^xsd:string .
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