Fixes for some steroid terms

[pgaudet]

Fixed parents:

• 3beta-hydroxy-5beta-steroid dehydrogenase activity: add parent: is_a: GO:0033764 ! steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
• 3beta-hydroxy-5alpha-steroid dehydrogenase activity: add parent: is_a: GO:0033764 ! steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
• sterol desaturase activity: change parent:
• from: GO:0016705 ! oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
• to GO:0016717 ! oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

Added missing xrefs:

• 16-alpha-hydroxysteroid dehydrogenase [NAD(P)+] activity: add xrefs:
• RHEA:19857 {source="skos:narrowMatch"}
• RHEA:19861 {source="skos:narrowMatch"}
• androsterone dehydrogenase [NAD(P)+] activity: add xrefs
• RHEA:20377 {source="skos:narrowMatch"}
• RHEA:20381 {source="skos:narrowMatch"}
• testosterone 16-beta-hydroxylase activity: add parent 'steroid hydroxylase activity'
• progesterone 11-alpha-monooxygenase activity changed parent 'steroid hydroxylase activity' from to more specific 'progesterone monooxygenase activity'
• estradiol 6-beta-monooxygenase activity add parent: 'steroid hydroxylase activity'
• 3''-deamino-3''-oxonicotianamine reductase activity: add xrefs:
• RHEA:16137 {source="skos:narrowMatch"}
• RHEA:16141 {source="skos:narrowMatch"}

[pgaudet]

PR: #29306

[pgaudet]

• GO:0047024 5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity: add parent GO:0008395 ! steroid hydroxylase activity
• GO:0050212 'progesterone 11-alpha-monooxygenase activity' add parent GO:0050214 ! progesterone monooxygenase activity
• GO:0000253 3-keto sterol reductase activity: change label to 3-beta-hydroxysteroid 3-dehydrogenase activity to match EC; add parent GO:0033764 ! steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
• GO:0062179 vitamin D 23-hydroxylase activity: add parent: GO:0008395 ! steroid hydroxylase activity
• vitamin D 24-hydroxylase activity: add parent: GO:0008395 ! steroid hydroxylase activity
• vitamin D 25-hydroxylase activity : add parent: GO:0008395 ! steroid hydroxylase activity

[pgaudet]

• 'steroid hydroxylase activity' >> added synonym 'steroid monooxygenase activity'; but we should probably swap label and synonym, as 'monooxygenase' is broader than hydroxylase

[pgaudet]

Noting that a sterol is a hydroxysteroid, so we fixed parent/children relations acordingly.

[pgaudet]

• Obsolete 3-beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (NAD+) activity because it represents a specific substrate of 3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity

• replaced_by: GO:0102175
  Single Noctua annotation (UniProt), changed.

• GO:0102175 3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity

• add xref: EC:1.1.1.41

• change parents from is_a: GO:0016616 ! oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor and is_a: GO:0033764 ! steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

• to is_a: GO:0000252 ! 3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity