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add args to Shiny app
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@gaospecial
gaospecial committed Dec 28, 2023
1 parent 623a542 commit 38547f1
Showing 1 changed file with 104 additions and 106 deletions.
210 changes: 104 additions & 106 deletions inst/shiny/shinyApp.R
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Original file line number Diff line number Diff line change
@@ -1,117 +1,87 @@
library(shiny)
library(ggVennDiagram)
devtools::load_all(path = rprojroot::find_root("DESCRIPTION"))
# devtools::load_all(path = rprojroot::find_root("DESCRIPTION"))
library(ggplot2)
library(bslib)
library(htmltools)

# SMALL HTML ELEMENTS -------------------------------------------------------------


## Basic Elements of Sidebar ---------------------------------------------

### Venn plot primary control --------
venn_plot_primary_ctrl = accordion_panel(
"Primary controls",
# Set number
sliderInput(
inputId = 'nsets',
label = "No. of Sets:",
value = 4,
min = 2,
max = 10,
step = 1
),

hr(),

# dynamic inputs
uiOutput("text_inputs")
)

venn_plot_other_ctrl = accordion_panel(
"Other controls",
"Other controls go here"
)

# PAGE COMPONENTS ------

## Venn plot sidebar -----

venn_plot_card_sidebar = sidebar(
width = "25em",
accordion(
venn_plot_primary_ctrl,
venn_plot_other_ctrl
),
actionButton("plot_btn", "Plot Now!")
)

# PAGE LAYOUT-----

## Navset card UI
ui_navset_card_tab = navset_card_tab(
height = 700,
full_screen = TRUE,
title = "Draw a Venn diagram or Upset plot",

# Venn plot card
nav_panel( # for Venn plot
"Venn Diagram",
card_title("A plotly plot"),
layout_sidebar(
sidebar = venn_plot_card_sidebar,

# others
uiOutput('plot_note'),

# plot
plotOutput("plot"),

# download button
conditionalPanel(
condition = "output.plot",
downloadButton("download_png", "Download as PNG"),
downloadButton("download_pdf", "Download as PDF")
)
)
),

# Upset plot card
nav_panel( # for Upset plot
"Upset Plot",
card_title("A leaflet plot"),
markdown("leaflet_widget")
),

# Help card
nav_panel( # for help
shiny::icon("circle-info"),
markdown("Learn more about [htmlwidgets](http://www.htmlwidgets.org/)")
)
)


ui_page_sidebar = page_sidebar(
title = "Penguins dashboard",
sidebar = venn_plot_card_sidebar,
navset_card_underline(
title = "Histograms by species",
nav_panel("Bill Length", plotOutput("bill_length")),
nav_panel("Bill Depth", plotOutput("bill_depth")),
nav_panel("Body Mass", plotOutput("body_mass"))
)
)
# ui_navset_card_tab = navset_card_tab(
# height = 700,
# full_screen = TRUE,
# title = "Draw a Venn diagram or Upset plot",
#
# # Venn plot card
# nav_panel( # for Venn plot
# "Venn Diagram",
# card_title("A plotly plot"),
# layout_sidebar(
# sidebar = sidebar("Just a sidebar"),
#
# # others
# uiOutput('plot_note'),
#
# # plot
# plotOutput("plot"),
#
# # download button
# conditionalPanel(
# condition = "output.plot",
# downloadButton("download_png", "Download as PNG"),
# downloadButton("download_pdf", "Download as PDF")
# )
# )
# ),
#
# # Upset plot card
# nav_panel( # for Upset plot
# "Upset Plot",
# card_title("A leaflet plot"),
# markdown("leaflet_widget")
# ),
#
# # Help card
# nav_panel( # for help
# shiny::icon("circle-info"),
# markdown("Learn more about [htmlwidgets](http://www.htmlwidgets.org/)")
# )
# )
#
#
# ui_page_sidebar = page_sidebar(
# title = "Penguins dashboard",
# sidebar = sidebar("Just a sidebar"),
# navset_card_underline(
# title = "Histograms by species",
# nav_panel("Bill Length", plotOutput("bill_length")),
# nav_panel("Bill Depth", plotOutput("bill_depth")),
# nav_panel("Body Mass", plotOutput("body_mass"))
# )
# )

# THEME -----
bs_theme = bs_theme(version = 5)
bs_theme = bs_theme |>
bs_add_rules(xfun::read_utf8(xfun::magic_path("shinyApp.css")) |> paste(collapse = "\n"))
bs_add_rules(".class {display: block;}")

# NATIVE SHINY UI ------------------------------------------------------------------

ui = fluidPage(
theme = bs_theme,
theme = bs_theme(version = 5),
tags$head(
tags$link(rel = "stylesheet", type = "text/css", href = "shinyApp.css")
),
titlePanel("ggVennDiagram Shiny App"),
sidebarLayout(
sidebarPanel(
Expand All @@ -133,9 +103,30 @@ ui = fluidPage(
accordion(
open = FALSE,
accordion_panel(
"Other Controls",
selectInput("label-geom", 'label-geom', c("text", "label"))
)),
"Label Controls",
numericInput("set_size", "size of set label", 5, min = 0, max = 10, step = 1),
selectInput("label", "mode",c("both", "count", "percent", "none"), selected = "both"),
selectInput("label_geom", 'geom', c("text", "label"), selected = "label"),
numericInput("label_alpha", "alpha", 0.5, min = 0, max = 1, step = 0.1),
colourInput("label_color", "color", value = "white"),
numericInput("label_size", "size", 3),
numericInput("label_percent_digit", "digit", 0, step = 1, min = 0, max = 3),
numericInput("label_txtWidth", 'text width', 40, step = 1, min = 1, max = 100)
),
accordion_panel(
"Edge Controls",
selectInput("edge_lty", "line type", c("solid", "dashed", "dotted", "dotdash", "longdash", "twodash"), selected = "solid"),
numericInput("edge_size", 'size', 1, step = 1, min = 0, max = 10)
),
accordion_panel(
"Upset Controls",
numericInput("nintersects", "nintersects", 20, min = 1, max = 100, step = 1),
selectInput("order.intersect.by", "order of intersect",c("size", "name", "none"), selected = "none"),
selectInput("order.set.by", 'order of set', c("size", "name", "none"), selected = 'none'),
numericInput("relative_height", 'relative height', 3, min = 2, max = 6, step = 0.1),
numericInput('relative_width', 'relative width', 0.3, min = 0.1, max = 1, step = 0.1)
),
),


fluidRow(
Expand All @@ -145,11 +136,11 @@ ui = fluidPage(
inputId = "force_upset",
label = "Upset"
)),
column(8,
checkboxInput(
"show_intersect",
"Show Intersects"
))
# column(8,
# checkboxInput(
# "show_intersect",
# "Show Intersects"
# ))
),

# 画图按钮
Expand Down Expand Up @@ -180,14 +171,6 @@ ui = fluidPage(


server = function(input, output, session) {
# 监听按钮的点击事件，更新 slider 的值
observeEvent(input$increase_btn, {
updateSliderInput(session, "nsets", value = input$nsets + 1)
})

observeEvent(input$decrease_btn, {
updateSliderInput(session, "nsets", value = input$nsets - 1)
})

# 动态生成文本输入框的UI
output$text_inputs = renderUI({
Expand Down Expand Up @@ -229,10 +212,25 @@ server = function(input, output, session) {
category_names[[i]] = input[[paste0("setname_",i)]]
set_color[[i]] = input[[paste0("setcolor_", i)]]
}
set_color = unlist(set_color)
return(ggVennDiagram(x,
category.names = category_names,
set_color = unlist(set_color),
force_upset = input$force_upset))
# show_intersect = input$show_intersect,
set_color = set_color,
set_size = input$set_size,
label = input$label,
label_alpha = input$label_alpha,
label_size = input$label_size,
label_percent_digit = input$label_percent_digit,
label_txtWidth = input$label_txtWidth,
edge_lty = input$edge_lty,
edge_size = input$edge_size,
force_upset = input$force_upset,
nintersects = input$nintersects,
order.intersect.by = input$order.intersect.by,
order.set.by = input$order.set.by,
relative_height = input$relative_height,
relative_width = input$relative_width))
}

# 监听画图按钮的点击事件
Expand Down

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