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fgbio release version 0.1.2
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@nh13 nh13 released this 07 Jan 20:39
0.1.2
f747add

Release of fgbio that contains tools:

  1. ErrorRateByReadPosition: Calculates the error rate by read position on mapped BAMs.
  2. ReviewConsensusVariants: Extracts data to make reviewing of variant calls from consensus reads easier.
  3. PickIlluminaIndices: Picks a set of molecular indices that should work well together.
  4. AssessPhasing: Assess the accuracy of phasing for a set of variants.
  5. AutoGenerateReadGroupsByName: Adds read groups to a BAM file for a single sample by parsing the read names.
  6. MakeTwoSampleMixtureVcf: Tool to make a VCF with genotypes constructed by mixing the genotypes of two other samples.

Numerous bug fixes, performance improvements, and changes have been made to existing tools and classes. Refer to the commit history for such changes.

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