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[pre-commit.ci] auto fixes from pre-commit.com hooks
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pre-commit-ci[bot] committed Sep 2, 2024
1 parent 4e2ed61 commit f558c9b
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Showing 5 changed files with 8 additions and 3 deletions.
1 change: 1 addition & 0 deletions scripts/searchfirst.py
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"""SearchFirst script to run a simple segmentation."""

import typer

from faim_wako_searchfirst.main import run


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1 change: 1 addition & 0 deletions tests/test_cellpose.py
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from pathlib import Path

import pytest

from faim_wako_searchfirst.main import run


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3 changes: 2 additions & 1 deletion tests/test_filter.py
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import numpy as np
import pytest
from faim_wako_searchfirst.filter import border, dilate, feature
from skimage.io import imread

from faim_wako_searchfirst.filter import border, dilate, feature


@pytest.fixture
def _label_image():
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3 changes: 2 additions & 1 deletion tests/test_main.py
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import numpy as np
import pandas as pd
import pytest
from skimage.io import imread

from faim_wako_searchfirst.filter import area, bounding_box, solidity
from faim_wako_searchfirst.main import run
from faim_wako_searchfirst.sample import centers, dense_grid, grid_overlap
from faim_wako_searchfirst.segment import threshold
from skimage.io import imread


@pytest.fixture
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3 changes: 2 additions & 1 deletion tests/test_sample.py
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import pandas as pd
import pytest
from faim_wako_searchfirst.sample import object_centered_grid, region_centered_grid
from skimage.io import imread

from faim_wako_searchfirst.sample import object_centered_grid, region_centered_grid


@pytest.fixture
def _label_image():
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