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Use ruff in pre-commit, update versions #239

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3 changes: 1 addition & 2 deletions .github/workflows/fmu-ensemble.yml
Original file line number Diff line number Diff line change
Expand Up @@ -50,8 +50,7 @@ jobs:

- name: 🕵️ Check code style
run: |
black --check src/ tests/test_*.py setup.py
flake8 src tests/*.py
pre-commit run --all-files
- name: 🤖 Run tests
run: |
Expand Down
17 changes: 10 additions & 7 deletions .pre-commit-config.yaml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
repos:
- repo: https://github.com/pre-commit/pre-commit-hooks
rev: v2.5.0
rev: v4.5.0
hooks:
- id: no-commit-to-branch
args: ['--branch', 'master']
Expand All @@ -12,12 +12,15 @@ repos:
- id: mixed-line-ending
- id: trailing-whitespace

- repo: https://github.com/ambv/black
rev: 20.8b1
- repo: https://github.com/psf/black
rev: 23.11.0
hooks:
- id: black

- repo: https://gitlab.com/pycqa/flake8
rev: 3.8.4
hooks:
- id: flake8
- repo: https://github.com/astral-sh/ruff-pre-commit
rev: v0.1.7
hooks:
- id: ruff
args: [ --fix ]

exclude: "tests/data/testensemble-reek001"
2 changes: 0 additions & 2 deletions HISTORY.rst
Original file line number Diff line number Diff line change
Expand Up @@ -19,5 +19,3 @@ work from at leastL:
* Smørbukk Sør webportal
* Post-processing library made for webportal (2017/2018) https://github.com/Statoil/fmu_postprocessing
* PyPostFMU https://git.equinor.com/FDIL/pypostfmu


2 changes: 0 additions & 2 deletions docs/advancedusage.rst
Original file line number Diff line number Diff line change
Expand Up @@ -334,5 +334,3 @@ ensemble only for that particular datatype:
0 LowerReek 1105.552718 6.070259e+08 1599.113406 109885776.0
1 MidReek 966.315122 9.608399e+08 1586.559663 161875872.0
2 UpperReek 592.824625 1.028779e+09 1571.164775 148655376.0
152 changes: 79 additions & 73 deletions docs/conf.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,4 @@
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Documentation build configuration file, created by
# sphinx-quickstart on Tue Jul 9 22:26:36 2013.
Expand All @@ -20,46 +19,50 @@
# directory, add these directories to sys.path here. If the directory is
# relative to the documentation root, use os.path.abspath to make it
# absolute, like shown here.
sys.path.insert(0, os.path.abspath('src'))
sys.path.insert(0, os.path.abspath("src"))

# Get the project root dir, which is the parent dir of this
cwd = os.getcwd()
project_root = os.path.dirname(cwd) + '/src'
project_root = os.path.dirname(cwd) + "/src"

# Insert the project root dir as the first element in the PYTHONPATH.
# This lets us ensure that the source package is imported, and that its
# version is used.
sys.path.insert(0, project_root)

print('SYS!', sys.path)
print("SYS!", sys.path)

import fmu.ensemble
import fmu.ensemble # noqa: E402

# -- General configuration ---------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
#needs_sphinx = '1.0'
# needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom ones.
extensions = ['sphinx.ext.autodoc', 'sphinx.ext.viewcode',
'sphinx.ext.napoleon', 'sphinx.ext.mathjax']
extensions = [
"sphinx.ext.autodoc",
"sphinx.ext.viewcode",
"sphinx.ext.napoleon",
"sphinx.ext.mathjax",
]

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
templates_path = ["_templates"]

# The suffix of source filenames.
source_suffix = '.rst'
source_suffix = ".rst"

# The encoding of source files.
#source_encoding = 'utf-8-sig'
# source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'
master_doc = "index"

# General information about the project.
project = u'fmu-ensemble'
copyright = u"Equinor"
project = "fmu-ensemble"
copyright = "Equinor"

# The version info for the project you're documenting, acts as replacement
# for |version| and |release|, also used in various other places throughout
Expand All @@ -72,142 +75,140 @@

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#language = None
# language = None

# There are two options for replacing |today|: either, you set today to
# some non-false value, then it is used:
#today = ''
# today = ''
# Else, today_fmt is used as the format for a strftime call.
#today_fmt = '%B %d, %Y'
# today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['_build']
exclude_patterns = ["_build"]

# Sort members by input order in classes
autodoc_member_order = 'bysource'
autodoc_default_flags = ['members', 'show_inheritance']
autodoc_member_order = "bysource"
autodoc_default_flags = ["members", "show_inheritance"]


# The reST default role (used for this markup: `text`) to use for all
# documents.
#default_role = None
# default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
#add_function_parentheses = True
# add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#add_module_names = True
# add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#show_authors = False
# show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
pygments_style = "sphinx"

# A list of ignored prefixes for module index sorting.
#modindex_common_prefix = []
# modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built
# documents.
#keep_warnings = False
# keep_warnings = False


# -- Options for HTML output -------------------------------------------

# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
html_theme = 'sphinx_rtd_theme'
html_theme = "sphinx_rtd_theme"

# Theme options are theme-specific and customize the look and feel of a
# theme further. For a list of options available for each theme, see the
# documentation.
#html_theme_options = {}
# html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
#html_theme_path = []
# html_theme_path = []

# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
#html_title = None
# html_title = None

# A shorter title for the navigation bar. Default is the same as
# html_title.
#html_short_title = None
# html_short_title = None

# The name of an image file (relative to this directory) to place at the
# top of the sidebar.
html_logo = '_static/equinor-logo2.jpg'
html_logo = "_static/equinor-logo2.jpg"

# The name of an image file (within the static path) to use as favicon
# of the docs. This file should be a Windows icon file (.ico) being
# 16x16 or 32x32 pixels large.
#html_favicon = None
# html_favicon = None

# Add any paths that contain custom static files (such as style sheets)
# here, relative to this directory. They are copied after the builtin
# static files, so a file named "default.css" will overwrite the builtin
# "default.css".
html_static_path = ['_static']
html_static_path = ["_static"]

# If not '', a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
#html_last_updated_fmt = '%b %d, %Y'
# html_last_updated_fmt = '%b %d, %Y'

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#html_use_smartypants = True
# html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#html_sidebars = {}
# html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names
# to template names.
#html_additional_pages = {}
# html_additional_pages = {}

# If false, no module index is generated.
#html_domain_indices = True
# html_domain_indices = True

# If false, no index is generated.
#html_use_index = True
# html_use_index = True

# If true, the index is split into individual pages for each letter.
#html_split_index = False
# html_split_index = False

# If true, links to the reST sources are added to the pages.
#html_show_sourcelink = True
# html_show_sourcelink = True

# If true, "Created using Sphinx" is shown in the HTML footer.
# Default is True.
#html_show_sphinx = True
# html_show_sphinx = True

# If true, "(C) Copyright ..." is shown in the HTML footer.
# Default is True.
#html_show_copyright = True
# html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages
# will contain a <link> tag referring to it. The value of this option
# must be the base URL from which the finished HTML is served.
#html_use_opensearch = ''
# html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
#html_file_suffix = None
# html_file_suffix = None

# Output file base name for HTML help builder.
htmlhelp_basename = 'fmu-ensemble-doc'
htmlhelp_basename = "fmu-ensemble-doc"


# -- Options for LaTeX output ------------------------------------------

latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#'papersize': 'letterpaper',

# The font size ('10pt', '11pt' or '12pt').
#'pointsize': '10pt',

# Additional stuff for the LaTeX preamble.
#'preamble': '',
}
Expand All @@ -216,44 +217,46 @@
# (source start file, target name, title, author, documentclass
# [howto/manual]).
latex_documents = [
('index', 'fmu-ensemble.tex',
u'fmu-ensemble Documentation',
u'Jan C. Rivenaes', 'manual'),
(
"index",
"fmu-ensemble.tex",
"fmu-ensemble Documentation",
"Jan C. Rivenaes",
"manual",
),
]

# The name of an image file (relative to this directory) to place at
# the top of the title page.
#latex_logo = None
# latex_logo = None

# For "manual" documents, if this is true, then toplevel headings
# are parts, not chapters.
#latex_use_parts = False
# latex_use_parts = False

# If true, show page references after internal links.
#latex_show_pagerefs = False
# latex_show_pagerefs = False

# If true, show URL addresses after external links.
#latex_show_urls = False
# latex_show_urls = False

# Documents to append as an appendix to all manuals.
#latex_appendices = []
# latex_appendices = []

# If false, no module index is generated.
#latex_domain_indices = True
# latex_domain_indices = True


# -- Options for manual page output ------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
('index', 'fmu-ensemble',
u'fmu-ensemble Documentation',
[u'Jan C. Rivenaes'], 1)
("index", "fmu-ensemble", "fmu-ensemble Documentation", ["Jan C. Rivenaes"], 1)
]

# If true, show URL addresses after external links.
#man_show_urls = False
# man_show_urls = False


# -- Options for Texinfo output ----------------------------------------
Expand All @@ -262,22 +265,25 @@
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
('index', 'fmu-ensemble',
u'fmu-ensemble Documentation',
u'Jan C. Rivenaes',
'fmu-ensemble',
'One line description of project.',
'Miscellaneous'),
(
"index",
"fmu-ensemble",
"fmu-ensemble Documentation",
"Jan C. Rivenaes",
"fmu-ensemble",
"One line description of project.",
"Miscellaneous",
),
]

# Documents to append as an appendix to all manuals.
#texinfo_appendices = []
# texinfo_appendices = []

# If false, no module index is generated.
#texinfo_domain_indices = True
# texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#texinfo_show_urls = 'footnote'
# texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#texinfo_no_detailmenu = False
# texinfo_no_detailmenu = False
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