Add epidemic risk vignette and probability_contain()
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joshwlambert
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Jun 8, 2023
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Thanks for the comments @jamesmbaazam! |
Co-authored-by: James Azam <[email protected]>
Co-authored-by: James Azam <[email protected]>
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This PR addresses #12 (and makes a start on #13).
The primary focus of this PR is to add a vignette that discusses the application of {superspreading} functions to decision making and policy. This takes inspiration from the document initially shared in #5 and mentioned in #12 which is a preprint used by SAGE during the COVID-19 pandemic.
As part of this vignette on control measures, a new function was added:
probability_contain(). This implements population-level control measures. It does not complete the requirements of #13 which also requires individual level control and may relate to development from epiverse-trace/epichains#3.Tests and documentation are added for
probability_contain(). {bpmodels} is added as a remote dependency, and {ggtext} as a suggested dependency.