Code

Update simulation functions#44

Code

Merged

joshwlambert merged 11 commits intomainepiverse-trace/simulist:mainfrom updt_sim_funcsepiverse-trace/simulist:updt_sim_funcsCopy head branch name to clipboardJan 4, 2024

+136-118

Commits

Commits on Jan 4, 2024

• update sim_linelist documentation

  Show description for bee12c2
  

  3 peoplecommitted
  bee12c2

• changed default add_ct to TRUE for sim_linelist and sim_outbreak

  joshwlambert

  committed
  93939ca

• updated sim_linelist and sim_outbreak for new add_ct argument default

  joshwlambert

  committed
  a5ceeff

• better input checking for delay distributions in exported simulation functions

  joshwlambert

  committed
  13d9ee1

• renamed min_chain_size to min_outbreak_size

  joshwlambert

  committed
  5cc4b1c

• added stop criteria for chain sim loop

  joshwlambert

  committed
  a377c2e

• added test for exceeding max iterations for chain sim

  joshwlambert

  committed
  cad3795

• removed dots from exported simulation functions

  joshwlambert

  committed
  4c990cf

• fixed partial arg match in sim_contacts

  Show description for 1d76df2
  

  joshwlambert

  and

  Bisaloo

  committed
  1d76df2

• remove col by name rather than position in .sim_contacts_tbl

  joshwlambert

  committed
  df922da

• reduce cyclocomp of delay distribution input checking

  joshwlambert

  committed
  07fa8e3