v3.2.0

Including support for 2 new analysis types to be submitted:

• SEQUENCE_CONSENSUS
• FILTERED_VARIATION

These two analysis types are intended to be used for systematic analysis of read data within the ENA.

v3.1.1

Release to incorporate major bug fix. This now enables for full functionality when users have multiple files to upload for a single submission.

v3.1.0

Release to include updates pertaining to the acceptance of the new PHYLOGENY_ANALYSIS analysis type.

• Accept PHYLOGENY_ANALYSIS analysis type.
• Handle optional run references, which would be applicable for PHYLOGENY_ANALYSIS.

v3.0.0

This release includes incorporation of the new Webin V2 API and specifically, changes that support usage it, as described below:

• Update to create a single Webin XML for submission.
• Accepting usage of both submission endpoints associated with Webin V2 API.
• Adapting submission section to use appropriate request.
• Tidying up and inclusion of accession retrieval, following submission.
• Documentation changes.
• Minor code refactoring and tidy-up.

v2.0.0

Second stable version of ena-analysis-submitter. This tool enables users to submit certain analysis objects via Webin-REST. The tool uploads files, creates appropriate analysis and submission XMLs and carries out the submission on behalf of the user. Check the README for more information on usage.

This release includes the following updates:

• Dockerisation of the tool, includes dockerfile, link to the docker repository and image, instructions on usage.
• New parameters and restructuring of contents of the configuration file.
• More structured alias generation.
• Parameterisation of test flag
• Improved README.
• Bug fixes.