Code

BayesSpace v1.11.3#111

Code

Open

senbaikang wants to merge 39 commits intoedward130603:masteredward130603/BayesSpace:masterfrom bdsc-tds:masterbdsc-tds/BayesSpace:masterCopy head branch name to clipboard

+2,133-842

Commits

Commits on Jun 3, 2023

• fix: bugs when reading H5

  

  Your Name

  committed
  6b73168

  Copy full SHA for 6b73168

Commits on Jun 4, 2023

• fix: bugs

  

  Your Name

  committed
  3c8d3a9

  Copy full SHA for 3c8d3a9

Commits on Jun 5, 2023

• fix: bugs

  

  Your Name

  committed
  5f73f19

  Copy full SHA for 5f73f19

Commits on Jul 5, 2023

• fix: added sinity check and core tuning

  senbaikang

  committed
  86de359

  Copy full SHA for 86de359

• doc: updated doc

  senbaikang

  committed
  3c0f502

  Copy full SHA for 3c0f502

Commits on Sep 7, 2023

• fix: fixed bugs & faster code

  senbaikang

  committed
  40fdaa1

  Copy full SHA for 40fdaa1

Commits on Sep 11, 2023

• feat: adaptive mcmc

  senbaikang

  committed
  e20e5a3

  Copy full SHA for e20e5a3

Commits on Sep 20, 2023

• feat: adaptive mcmc

  senbaikang

  committed
  d6abb37

  Copy full SHA for d6abb37

Commits on Sep 22, 2023

• feat: adaptive MCMC

  senbaikang

  committed
  7186e72

  Copy full SHA for 7186e72

Commits on Sep 25, 2023

• feat: label adjustment

  senbaikang

  committed
  94a9df0

  Copy full SHA for 94a9df0

Commits on Oct 4, 2023

• fix: bugs

  senbaikang

  committed
  7129c45

  Copy full SHA for 7129c45

Commits on Oct 5, 2023

• feat: option for restricted adaptive MCMC

  senbaikang

  committed
  e25d9b2

  Copy full SHA for e25d9b2

Commits on Dec 8, 2023

• fix: [v1.11.7] bugs in func

  senbaikang

  committed
  a9c094e

  Copy full SHA for a9c094e

Commits on Feb 6, 2024

• fix: bugs

  senbaikang

  committed
  b5bd8f2

  Copy full SHA for b5bd8f2

Commits on Feb 16, 2024

• fix: [v1.11.8] bugs in processing z

  senbaikang

  committed
  f69e023

  Copy full SHA for f69e023

• fix: [v1.11.8] bugs in processing z

  senbaikang

  committed
  6d02fdf

  Copy full SHA for 6d02fdf

Commits on Feb 19, 2024

• fix： bug

  senbaikang

  authored
  483645e

  Copy full SHA for 483645e

• fix: updated outdated functions

  senbaikang

  committed
  65736e4

  Copy full SHA for 65736e4

• fix: updated outdated functions

  senbaikang

  committed
  98c1d15

  Copy full SHA for 98c1d15

• fix: updated outdated functions

  senbaikang

  committed
  8d34497

  Copy full SHA for 8d34497

Commits on Mar 7, 2024

• feat: [v1.11.10] refactored neighbor finding for subspots

  senbaikang

  committed
  2190e56

  Copy full SHA for 2190e56

• fix: bugs

  senbaikang

  committed
  554b98b

  Copy full SHA for 554b98b

• Support for VisiumHD (#1)

  Show description for 79e11b9
  senbaikang

  authored
  79e11b9

  Copy full SHA for 79e11b9

Commits on Mar 8, 2024

• fix: bugs

  senbaikang

  committed
  fc0d4c7

  Copy full SHA for fc0d4c7

Commits on Mar 13, 2024

• fix: cleaned up coords assignment for subspots

  senbaikang

  committed
  4a347ce

  Copy full SHA for 4a347ce

• fix: bug in plotting clusters

  senbaikang

  committed
  6140799

  Copy full SHA for 6140799

Commits on Mar 14, 2024

• feat: [v1.13.1] plot clusters align with the image

  senbaikang

  committed
  06b5cf6

  Copy full SHA for 06b5cf6

• fix: bugs

  senbaikang

  authored
  ec91302

  Copy full SHA for ec91302

Commits on Mar 18, 2024

• feat: [v1.13.2] parallelized PCA

  senbaikang

  committed
  d7ad525

  Copy full SHA for d7ad525

Commits on Mar 19, 2024

• feat: [v1.13.2] removed unrelated probes; parallized modeling of gene variance

  senbaikang

  committed
  6b28b43

  Copy full SHA for 6b28b43

Commits on Mar 20, 2024

• feat: [v1.13.4] thining in c++ code

  senbaikang

  committed
  db2d58d

  Copy full SHA for db2d58d

Commits on Mar 24, 2024

• fix: bugs

  senbaikang

  committed
  dff61c8

  Copy full SHA for dff61c8

Commits on Mar 25, 2024

• feat: [v1.13.5] customized number of subspots

  senbaikang

  committed
  18be765

  Copy full SHA for 18be765

• fix: bugs

  senbaikang

  committed
  9a5f742

  Copy full SHA for 9a5f742

Commits on Mar 26, 2024

• doc: updated doc

  senbaikang

  committed
  d3e9275

  Copy full SHA for d3e9275

Commits on Apr 2, 2024

• fix: typo

  senbaikang

  committed
  1fc79ae

  Copy full SHA for 1fc79ae

Commits on Apr 8, 2024

• feat: [v1.13.6] added a few helper functions

  senbaikang

  committed
  b9640f9

  Copy full SHA for b9640f9

Commits on Oct 15, 2024

• fix: bugs

  senbaikang

  committed
  df216c1

  Copy full SHA for df216c1

• doc: update NEWS

  senbaikang

  committed
  0d6b7ac

  Copy full SHA for 0d6b7ac