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EcoHealth Alliance

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  1. HP3 HP3 Public

    Repository for Host-Pathogen Phylogeny Project. Paper DOI: 10.1038/nature22975

    HTML 15 6

  2. fasterize fasterize Public

    High performance raster conversion for modern spatial data 🚀🌏▦

    C++ 182 15

  3. diagnostic-dashboard diagnostic-dashboard Public

    GRITS uses natural language processing to extract disease-related information from text, including disease names, symptoms, dates, locations, case and death counts, and more.

    JavaScript 6

  4. flirt flirt Public

    FLIRT uses airline flight schedule data to map the commercial flight network. It shows direct flights from a selected location, and can simulate passengers taking multi-leg itineraries.

    JavaScript 7

  5. eidr-connect eidr-connect Public

    EIDR Connect takes the data extracted by GRITS and structures it to reconstruct disease events as they are reported across different documents.

    CoffeeScript 1

  6. EpiTator EpiTator Public

    EpiTator annotates epidemiological information in text documents. It is the natural language processing framework that powers GRITS and EIDR Connect.

    Python 41 9

Repositories

Showing 10 of 204 repositories
  • open-rvfcast Public

    Wellcome Open RVFCast project repository

    ecohealthalliance/open-rvfcast’s past year of commit activity
    HTML 0 2 25 1 Updated Nov 24, 2024
  • SADSr-CoVs Public

    Code to perform species distribution modeling for Latinne et al. "Diversity and spillover risk of Swine Acute Diarrhea Syndrome and related coronaviruses in China and Southeast Asia"

    ecohealthalliance/SADSr-CoVs’s past year of commit activity
    R 0 0 0 0 Updated Nov 19, 2024
  • ehallm Public

    What the Package Does (Title Case)

    ecohealthalliance/ehallm’s past year of commit activity
    R 1 1 1 0 Updated Nov 7, 2024
  • RVF_SIR_Model Public

    Repository of code to simulate 34-years of RVFV transmission at a single pan in central South Africa.

    ecohealthalliance/RVF_SIR_Model’s past year of commit activity
    R 1 Apache-2.0 0 5 1 Updated Nov 1, 2024
  • ohcleandat Public

    One Health Data Cleaning and Quality Checking Package

    ecohealthalliance/ohcleandat’s past year of commit activity
    R 1 MIT 0 17 0 Updated Oct 23, 2024
  • bat_viral_detection_reproduction Public

    Investigating reproductive effects on viral detection in bats

    ecohealthalliance/bat_viral_detection_reproduction’s past year of commit activity
    R 0 0 0 0 Updated Oct 5, 2024
  • fasterize Public

    High performance raster conversion for modern spatial data 🚀🌏▦

    ecohealthalliance/fasterize’s past year of commit activity
    C++ 182 15 25 (1 issue needs help) 0 Updated Oct 2, 2024
  • github-archive Public

    organizational archive for github

    ecohealthalliance/github-archive’s past year of commit activity
    R 1 MIT 0 0 0 Updated Sep 18, 2024
  • rig-slides Public
    ecohealthalliance/rig-slides’s past year of commit activity
    R 0 0 0 0 Updated Sep 4, 2024
  • awesome-parasite Public

    A curated list of host-parasite information

    ecohealthalliance/awesome-parasite’s past year of commit activity
    37 4 10 0 Updated Aug 17, 2024
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