Merge pull request #50 from eco4cast/page-updates

Page updates

dashboard/instructions.qmd

@@ -62,7 +62,7 @@ The file is a csv format with the following columns:
 -   `project_id`: use `usgsrc4cast`
 
 -   `model_id`: the short name of the model defined as the model_id in your registration. The model_id should have no spaces.
-    `model_id` should reflect a method to forecast one or a set of target variables and must be unique to the neon4cast challenge.
+    `model_id` should reflect a method to forecast one or a set of target variables and must be unique to the `usgsrc4cast` challenge.
 
 -   `datetime`: forecast timestamp.
     Format `%Y-%m-%d %H:%M:%S` with UTC as the time zone.

dashboard/performance.qmd

@@ -15,7 +15,7 @@ source("R/plot-utils.R")
 #source("../R/ignore_sigpipes.R")
 #ignore_sigpipe()
 
-aquatics_focal_sites <- c("USGS-05553700", "USGS-01463500")
+aquatics_focal_sites <- c("USGS-05553700", "USGS-14211720")
 ```
 
 This page visualizes the forecasts and forecast performance for the focal target variables.
@@ -88,7 +88,7 @@ best_P1D_scores <- df_P1D_scores |>
 Forecasts submitted on `r max(lubridate::as_date(df_P1D$reference_datetime))`
 
 
-### Aquatics: Chlorophyll-a
+### River Chlorophyll-a
 
 Forecast summaries are available [here](https://radiantearth.github.io/stac-browser/#/external/raw.githubusercontent.com/eco4cast/usgsrc4cast-ci/main/catalog/summaries/aquatics/Daily_Chlorophyll_a/collection.json)
 
@@ -113,7 +113,7 @@ Below are forecasts submitted 30 days ago and include the observations used to e
 
 ::: panel-tabset
 
-### Aquatics: chrophyll-a
+### River Chlorophyll-a
 
 ```{r}
 best_models <- best_P1D_scores |> filter(variable == "chla") |> pull(model_id)

dashboard/targets.qmd

@@ -7,7 +7,7 @@ editor:
 
 ```{r  message=FALSE, echo = FALSE}
 library(tidyverse)
-aquatics_focal_sites <- c("USGS-05553700", "USGS-01463500")
+aquatics_focal_sites <- c("USGS-05553700", "USGS-14211720")
 ```
 
 ```{r message=FALSE, echo = FALSE}
@@ -36,14 +36,13 @@ This challenge focuses on forecasting river chlorophyll-a at select USGS monitor
 <!-- -   Aquatics: `r aquatics_focal_sites` -->
 
 As you develop your forecasting skills and want to expand to more sites, the targets are available at all 10 USGS sites.
-You may also consider submitting forecasts to sites that match your interests.
-For example, a class being taught in the winter may be more interested in forecasting southern sites while a summer class may focus on more northern sites.
+You may also consider submitting forecasts to sites that match your interests or locality. 
 
 More information about USGS sites can be found in the [site metadata](https://radiantearth.github.io/stac-browser/#/external/raw.githubusercontent.com/eco4cast/usgs4cast-ci/main/catalog/sites/collection.json) and on USGS's [website](https://dashboard.waterdata.usgs.gov/app/nwd/en/)
 
 ## Explore the targets and themes {#sec-targets}
 
-Information on the targets files for the "themes" is below.
+Information on the targets files for the river chlorophyll challenge is below.
 In the tables,
 
 -   "duration" is the time-step of the variable where `P1D` is a daily mean.
@@ -53,11 +52,11 @@ In the tables,
 -   The "latency" is the time between data collection and data availability in the targets file
 
 
-### Aquatics
+### River Chlorophyll
 
-![](https://projects.ecoforecast.org/neon4cast-catalog/img/neon_buoy.jpg)
+![](https://d9-wret.s3.us-west-2.amazonaws.com/assets/palladium/production/s3fs-public/media/images/Millstone-hab1.png)
 
-The aquatics theme challenges you to forecast daily mean water quality variables at up-to 10 river USGS sites.
+The river chlorophyll challenge invites you to forecast daily mean chlorophyll at up to 10 USGS river sites.
 
 ```{r echo = FALSE}
 url <- "https://sdsc.osn.xsede.org/bio230014-bucket01/challenges/targets/project_id=usgsrc4cast/duration=P1D/river-chl-targets.csv.gz"

submission_processing/process_submissions.R

@@ -200,6 +200,7 @@ if(nrow(submit_files) > 0){
                                       config$forecasts_bucket,
                                       "/raw/project_id=", config$project_id, "/",
                                       basename(submission_timestamp))
+          print(raw_bucket_object)
 
           minioclient::mc_cp(submission_timestamp, paste0(dirname(raw_bucket_object),"/", basename(submission_timestamp)))