update catalog

eco4cast · Dec 30, 2023 · dc402b9 · dc402b9
1 parent c115210
commit dc402b9
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Showing 150 changed files with 602 additions and 602 deletions.
diff --git a/catalog/forecasts/Aquatics/Daily_Chlorophyll_a/collection.json b/catalog/forecasts/Aquatics/Daily_Chlorophyll_a/collection.json
@@ -183,7 +183,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-01-31T00:00:00Z"
+          "2024-02-02T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Aquatics/Daily_Dissolved_oxygen/collection.json b/catalog/forecasts/Aquatics/Daily_Dissolved_oxygen/collection.json
@@ -13,42 +13,42 @@
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/GLEON_lm_lag_1day.json"
+      "href": "../../models/model_items/climatology.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/air2waterSat_2.json"
+      "href": "../../models/model_items/persistenceRW.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/cb_f1.json"
+      "href": "../../models/model_items/tg_arima.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/cb_prophet.json"
+      "href": "../../models/model_items/tg_ets.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/climatology.json"
+      "href": "../../models/model_items/GLEON_lm_lag_1day.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/persistenceRW.json"
+      "href": "../../models/model_items/air2waterSat_2.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_arima.json"
+      "href": "../../models/model_items/cb_f1.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_ets.json"
+      "href": "../../models/model_items/cb_prophet.json"
     },
     {
       "rel": "item",
@@ -168,7 +168,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-11-20T00:00:00Z"
+          "2024-11-22T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Aquatics/Daily_Water_temperature/collection.json b/catalog/forecasts/Aquatics/Daily_Water_temperature/collection.json
@@ -243,7 +243,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-11-20T00:00:00Z"
+          "2024-11-22T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Phenology/Daily_Green_chromatic_coordinate/collection.json b/catalog/forecasts/Phenology/Daily_Green_chromatic_coordinate/collection.json
@@ -28,47 +28,47 @@
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_bag_mlp.json"
+      "href": "../../models/model_items/tg_arima.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_ets.json"
+      "href": "../../models/model_items/tg_auto_adam.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_humidity_lm.json"
+      "href": "../../models/model_items/tg_bag_mlp.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_humidity_lm_all_sites.json"
+      "href": "../../models/model_items/tg_ets.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_lasso.json"
+      "href": "../../models/model_items/tg_humidity_lm.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_lasso_all_sites.json"
+      "href": "../../models/model_items/tg_humidity_lm_all_sites.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_precip_lm.json"
+      "href": "../../models/model_items/tg_lasso.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_arima.json"
+      "href": "../../models/model_items/tg_lasso_all_sites.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_auto_adam.json"
+      "href": "../../models/model_items/tg_precip_lm.json"
     },
     {
       "rel": "item",
@@ -143,7 +143,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-01-31T00:00:00Z"
+          "2024-02-02T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Phenology/Daily_Red_chromatic_coordinate/collection.json b/catalog/forecasts/Phenology/Daily_Red_chromatic_coordinate/collection.json
@@ -158,7 +158,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-01-31T00:00:00Z"
+          "2024-02-02T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Terrestrial/30min_latent_heat_flux/collection.json b/catalog/forecasts/Terrestrial/30min_latent_heat_flux/collection.json
@@ -58,7 +58,7 @@
       "interval": [
         [
           "2023-11-14T00:00:00Z",
-          "2024-01-06T00:00:00Z"
+          "2024-01-08T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/Terrestrial/Daily_Net_ecosystem_exchange/collection.json b/catalog/forecasts/Terrestrial/Daily_Net_ecosystem_exchange/collection.json
@@ -38,42 +38,42 @@
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/cb_prophet.json"
+      "href": "../../models/model_items/tg_ets.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/climatology.json"
+      "href": "../../models/model_items/tg_humidity_lm_all_sites.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/lasso.json"
+      "href": "../../models/model_items/tg_precip_lm.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/randfor.json"
+      "href": "../../models/model_items/cb_prophet.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_arima.json"
+      "href": "../../models/model_items/climatology.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_ets.json"
+      "href": "../../models/model_items/lasso.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_humidity_lm_all_sites.json"
+      "href": "../../models/model_items/randfor.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "../../models/model_items/tg_precip_lm.json"
+      "href": "../../models/model_items/tg_arima.json"
     },
     {
       "rel": "item",
@@ -133,7 +133,7 @@
       "interval": [
         [
           "2023-01-01T00:00:00Z",
-          "2024-02-01T00:00:00Z"
+          "2024-02-03T00:00:00Z"
         ]
       ]
     }

diff --git a/catalog/forecasts/models/collection.json b/catalog/forecasts/models/collection.json
@@ -123,12 +123,12 @@
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/tg_humidity_lm_all_sites.json"
+      "href": "model_items/tg_auto_adam.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/tg_auto_adam.json"
+      "href": "model_items/tg_humidity_lm_all_sites.json"
     },
     {
       "rel": "item",
@@ -148,22 +148,22 @@
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/GLEON_lm_lag_1day.json"
+      "href": "model_items/prophet_clim_ensemble.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/air2waterSat_2.json"
+      "href": "model_items/GLEON_lm_lag_1day.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/cb_f1.json"
+      "href": "model_items/air2waterSat_2.json"
     },
     {
       "rel": "item",
       "type": "application/json",
-      "href": "model_items/prophet_clim_ensemble.json"
+      "href": "model_items/cb_f1.json"
     },
     {
       "rel": "item",

diff --git a/catalog/forecasts/models/model_items/GLEON_JRabaey_temp_physics.json b/catalog/forecasts/models/model_items/GLEON_JRabaey_temp_physics.json
@@ -55,7 +55,7 @@
   "properties": {
     "description": "\nmodel info: NA\n\nSites: WLOU, ARIK, BARC, BIGC, BLDE, BLUE, BLWA, CARI, COMO, CRAM, CUPE, FLNT, GUIL, HOPB, KING, LECO, LEWI, LIRO, MART, MAYF, MCDI, MCRA, OKSR, POSE, PRIN, PRLA, PRPO, REDB, SUGG, SYCA, TECR, TOMB, TOOK, WALK\n\nVariables: Daily Water_temperature",
     "start_datetime": "2023-11-14",
-    "end_datetime": "2024-01-28",
+    "end_datetime": "2024-01-30",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/GLEON_lm_lag_1day.json b/catalog/forecasts/models/model_items/GLEON_lm_lag_1day.json
@@ -28,7 +28,7 @@
   "properties": {
     "description": "\nmodel info: NA\n\nSites: BARC, CRAM, LIRO, PRLA, PRPO, SUGG, TOOK\n\nVariables: Daily Dissolved_oxygen, Daily Water_temperature",
     "start_datetime": "2023-11-14",
-    "end_datetime": "2024-01-29",
+    "end_datetime": "2024-01-31",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/USGSHABs1.json b/catalog/forecasts/models/model_items/USGSHABs1.json
@@ -24,7 +24,7 @@
   "properties": {
     "description": "\nmodel info: NA\n\nSites: BLWA, TOMB, FLNT\n\nVariables: Daily Chlorophyll_a",
     "start_datetime": "2023-11-12",
-    "end_datetime": "2024-01-28",
+    "end_datetime": "2024-01-31",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/air2waterSat_2.json b/catalog/forecasts/models/model_items/air2waterSat_2.json
@@ -55,7 +55,7 @@
   "properties": {
     "description": "\nmodel info: NA\n\nSites: LEWI, LIRO, MART, MAYF, MCDI, MCRA, OKSR, POSE, PRIN, PRLA, PRPO, REDB, SUGG, SYCA, TECR, TOMB, ARIK, BARC, BIGC, BLDE, BLUE, BLWA, CARI, COMO, CRAM, CUPE, FLNT, GUIL, HOPB, KING, LECO, TOOK, WALK, WLOU\n\nVariables: Daily Dissolved_oxygen, Daily Water_temperature",
     "start_datetime": "2023-11-14",
-    "end_datetime": "2024-01-30",
+    "end_datetime": "2024-02-01",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/baseline_ensemble.json b/catalog/forecasts/models/model_items/baseline_ensemble.json
@@ -90,7 +90,7 @@
   "properties": {
     "description": "\nmodel info: NA\n\nSites: BLWA, COMO, CUPE, FLNT, GUIL, HOPB, SUGG, SYCA, TECR, TOMB, WALK, WLOU, MCDI, MCRA, POSE, PRIN, REDB, ARIK, BARC, BIGC, BLDE, BLUE, KING, LECO, LEWI, MART, MAYF, LENO, MLBS, MOAB, NIWO, NOGP, OAES, HARV, JERC, JORN, KONA, KONZ, LAJA, STEI, STER, TALL, TEAK, TREE, UKFS, UNDE, WOOD, WREF, YELL, SCBI, SERC, SJER, SOAP, SRER, ONAQ, ORNL, OSBS, PUUM, RMNP, DCFS, DELA, DSNY, GRSM, GUAN, ABBY, BART, BLAN, CLBJ, CPER\n\nVariables: Daily Water_temperature, Daily Red_chromatic_coordinate",
     "start_datetime": "2023-11-14",
-    "end_datetime": "2024-01-25",
+    "end_datetime": "2024-01-27",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/cb_f1.json b/catalog/forecasts/models/model_items/cb_f1.json
@@ -55,7 +55,7 @@
   "properties": {
     "description": [],
     "start_datetime": "2023-10-11",
-    "end_datetime": "2024-11-20",
+    "end_datetime": "2024-11-22",
     "providers": [
       {
         "url": "pending",

diff --git a/catalog/forecasts/models/model_items/cb_prophet.json b/catalog/forecasts/models/model_items/cb_prophet.json
@@ -71,6 +71,7 @@
       [-110.8355, 31.9107],
       [-121.9519, 45.8205],
       [-119.006, 37.0058],
+      [-110.5391, 44.9535],
       [-102.4471, 39.7582],
       [-119.2575, 37.0597],
       [-110.5871, 44.9501],
@@ -93,14 +94,13 @@
       [-84.2793, 35.9574],
       [-105.9154, 39.8914],
       [-105.5442, 40.035],
-      [-66.9868, 18.1135],
-      [-110.5391, 44.9535]
+      [-66.9868, 18.1135]
     ]
   },
   "properties": {
-    "description": "\nmodel info: NA\n\nSites: BARC, BLWA, CRAM, FLNT, LIRO, PRLA, PRPO, SUGG, TOMB, ABBY, BARR, BART, BLAN, BONA, CLBJ, CPER, DCFS, DEJU, DELA, DSNY, GRSM, GUAN, HARV, HEAL, JERC, JORN, KONA, KONZ, LAJA, LENO, MLBS, MOAB, NIWO, NOGP, OAES, ONAQ, ORNL, OSBS, PUUM, RMNP, SCBI, SERC, SJER, UNDE, STER, TREE, UKFS, SOAP, STEI, TALL, TOOL, WOOD, SRER, WREF, TEAK, ARIK, BIGC, BLDE, BLUE, CARI, GUIL, HOPB, KING, LECO, LEWI, MART, MAYF, MCDI, MCRA, POSE, PRIN, REDB, SYCA, TECR, WALK, WLOU, COMO, CUPE, YELL\n\nVariables: Daily Chlorophyll_a, Daily Green_chromatic_coordinate, Daily Net_ecosystem_exchange, Daily latent_heat_flux, Daily Dissolved_oxygen, Daily Red_chromatic_coordinate, Daily Water_temperature",
+    "description": "\nmodel info: NA\n\nSites: BARC, BLWA, CRAM, FLNT, LIRO, PRLA, PRPO, SUGG, TOMB, ABBY, BARR, BART, BLAN, BONA, CLBJ, CPER, DCFS, DEJU, DELA, DSNY, GRSM, GUAN, HARV, HEAL, JERC, JORN, KONA, KONZ, LAJA, LENO, MLBS, MOAB, NIWO, NOGP, OAES, ONAQ, ORNL, OSBS, PUUM, RMNP, SCBI, SERC, SJER, UNDE, STER, TREE, UKFS, SOAP, STEI, TALL, TOOL, WOOD, SRER, WREF, TEAK, YELL, ARIK, BIGC, BLDE, BLUE, CARI, GUIL, HOPB, KING, LECO, LEWI, MART, MAYF, MCDI, MCRA, POSE, PRIN, REDB, SYCA, TECR, WALK, WLOU, COMO, CUPE\n\nVariables: Daily Chlorophyll_a, Daily Green_chromatic_coordinate, Daily Net_ecosystem_exchange, Daily latent_heat_flux, Daily Red_chromatic_coordinate, Daily Dissolved_oxygen, Daily Water_temperature",
     "start_datetime": "2023-11-14",
-    "end_datetime": "2024-01-29",
+    "end_datetime": "2024-01-31",
     "providers": [
       {
         "url": "pending",
@@ -127,8 +127,8 @@
       "Daily Green_chromatic_coordinate",
       "Daily Net_ecosystem_exchange",
       "Daily latent_heat_flux",
-      "Daily Dissolved_oxygen",
       "Daily Red_chromatic_coordinate",
+      "Daily Dissolved_oxygen",
       "Daily Water_temperature"
     ],
     "table:columns": [
@@ -265,17 +265,17 @@
       "description": "Use `arrow` for remote access to the database. This R code will return results for this variable and model combination.\n\n### R\n\n```{r}\n# Use code below\n\nall_results <- arrow::open_dataset(s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=le/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org)\ndf <- all_results |> dplyr::collect()\n\n```\n       \n\nYou can use dplyr operations before calling `dplyr::collect()` to `summarise`, `select` columns, and/or `filter` rows prior to pulling the data into a local `data.frame`. Reducing the data that is pulled locally will speed up the data download speed and reduce your memory usage.\n\n\n"
     },
     "7": {
-      "type": "application/x-parquet",
-      "title": "Database Access for Daily Dissolved_oxygen",
-      "href": "s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=oxygen/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org",
-      "description": "Use `arrow` for remote access to the database. This R code will return results for this variable and model combination.\n\n### R\n\n```{r}\n# Use code below\n\nall_results <- arrow::open_dataset(s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=oxygen/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org)\ndf <- all_results |> dplyr::collect()\n\n```\n       \n\nYou can use dplyr operations before calling `dplyr::collect()` to `summarise`, `select` columns, and/or `filter` rows prior to pulling the data into a local `data.frame`. Reducing the data that is pulled locally will speed up the data download speed and reduce your memory usage.\n\n\n"
-    },
-    "8": {
       "type": "application/x-parquet",
       "title": "Database Access for Daily Red_chromatic_coordinate",
       "href": "s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=rcc_90/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org",
       "description": "Use `arrow` for remote access to the database. This R code will return results for this variable and model combination.\n\n### R\n\n```{r}\n# Use code below\n\nall_results <- arrow::open_dataset(s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=rcc_90/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org)\ndf <- all_results |> dplyr::collect()\n\n```\n       \n\nYou can use dplyr operations before calling `dplyr::collect()` to `summarise`, `select` columns, and/or `filter` rows prior to pulling the data into a local `data.frame`. Reducing the data that is pulled locally will speed up the data download speed and reduce your memory usage.\n\n\n"
     },
+    "8": {
+      "type": "application/x-parquet",
+      "title": "Database Access for Daily Dissolved_oxygen",
+      "href": "s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=oxygen/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org",
+      "description": "Use `arrow` for remote access to the database. This R code will return results for this variable and model combination.\n\n### R\n\n```{r}\n# Use code below\n\nall_results <- arrow::open_dataset(s3://anonymous@bio230014-bucket01/challenges/forecasts/parquet/duration=P1D/variable=oxygen/model_id=cb_prophet?endpoint_override=sdsc.osn.xsede.org)\ndf <- all_results |> dplyr::collect()\n\n```\n       \n\nYou can use dplyr operations before calling `dplyr::collect()` to `summarise`, `select` columns, and/or `filter` rows prior to pulling the data into a local `data.frame`. Reducing the data that is pulled locally will speed up the data download speed and reduce your memory usage.\n\n\n"
+    },
     "9": {
       "type": "application/x-parquet",
       "title": "Database Access for Daily Water_temperature",