.github/workflows/do_prediction_randfor.yml #406
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| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: "0 20 * * *" | |
| # push: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-22.04 | |
| container: | |
| image: eco4cast/rocker-neon4cast | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: install R packages | |
| run: R -e 'source("install.R")' | |
| - name: install extra R packages | |
| run: R -e 'install.packages(c("tidymodels", "bundle", "ranger"))' | |
| # Point to the right path, run the right Rscript command | |
| - name: Update observed meterological data | |
| run: Rscript ./Generate_forecasts/noaa_downloads/write_noaa_past_meteo.R | |
| - name: Run automatic prediction file (random forest) | |
| run: Rscript ./Generate_forecasts/tg_randfor/forecast_model.R | |
| - name: Run automatic prediction file (random forest all sites) | |
| run: Rscript ./Generate_forecasts/tg_randfor_all_sites/forecast_model.R | |
| - name: Run automatic prediction file (random forest, parameter and process uncertainty) | |
| run: Rscript ./Generate_forecasts/tg_randfor_parmens/forecast_model.R | |