Only sort for the diff exp case

ebi-gene-expression-group · Nov 29, 2024 · 60d94b0 · 60d94b0
1 parent 231d870
commit 60d94b0
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/tools/tertiary-analysis/decoupler/decoupler_pathway_inference.py b/tools/tertiary-analysis/decoupler/decoupler_pathway_inference.py
@@ -217,8 +217,8 @@
                 f"{args.method}_pvals": tf_pvals.iloc[0],
             }
         )
-    # sort ascending on the p-values
-    combined_df.sort_values(by=f"{args.method}_pvals", inplace=True)
+        # sort ascending on the p-values
+        combined_df.sort_values(by=f"{args.method}_pvals", inplace=True)
 
     # Save the combined dataframe to a file
     combined_df.to_csv(args.output + ".tsv", sep="\t")