-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
8 changed files
with
134 additions
and
2 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,9 @@ | ||
| from earth_data_utils import * | ||
|
|
||
| ssh_short_name = "SEA_SURFACE_HEIGHT_ALT_GRIDS_L4_2SATS_5DAY_6THDEG_V_JPL2205" | ||
|
|
||
| results = earthaccess.search_data( | ||
| short_name=ssh_short_name, | ||
| cloud_hosted=True, | ||
| temporal=("2021-07-01", "2021-09-30"), | ||
| ) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,41 @@ | ||
| [{ | ||
| "history_id" : "l35gxvzl580", | ||
| "history_input" : "\n\n\n# Suppress warnings\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/l35gxvzl580/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686761482808, | ||
| "history_end_time" : 1686761483335, | ||
| "history_notes" : null, | ||
| "history_process" : "wttkvt", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "npsj6zmjg8v", | ||
| "history_input" : "from earth_data_utils import *\n\nssh_short_name = \"SEA_SURFACE_HEIGHT_ALT_GRIDS_L4_2SATS_5DAY_6THDEG_V_JPL2205\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/npsj6zmjg8v/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/npsj6zmjg8v/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686761484815, | ||
| "history_end_time" : 1686761484929, | ||
| "history_notes" : null, | ||
| "history_process" : "yvo1ds", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "coh219tjkes", | ||
| "history_input" : "from search_data import *\n\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)\n\nauth = earthaccess.login(strategy=\"netrc\", persist=True)\nds = xr.open_mfdataset(earthaccess.open(results))\ngeojson_path = '/home/jovyan/gulf.json'\ngdf = gpd.read_file(geojson_path) #Return a GeoDataFrame object\n\n\nharmony_client = Client()\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nrequest = Request(\n collection=Collection(id=sst_short_name),\n shape=geojson_path,\n temporal={\n 'start': dt.datetime(2021, 8, 1, 1),\n 'stop': dt.datetime(2021, 8, 1, 2) \n },\n)\njob_id = harmony_client.submit(request)\nharmony_client.wait_for_processing(job_id, show_progress=False)\ndata = harmony_client.result_json(job_id)\nresults = harmony_client.result_urls(job_id, link_type=LinkType.s3)\nurls = list(results)\nurl = urls[0]\n", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/coh219tjkes/earth_access_authenticate.py\", line 1, in <module>\n from search_data import *\n File \"/Users/joe/gw-workspace/coh219tjkes/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/coh219tjkes/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686761486386, | ||
| "history_end_time" : 1686761486527, | ||
| "history_notes" : null, | ||
| "history_process" : "cgvhiy", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "dadwunxuogt", | ||
| "history_input" : "# Suppress warnings\nimport os\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs\nimport matplotlib.pyplot as plt\nfrom earth_access_authenticate import *\n\ncreds = harmony_client.aws_credentials()\ns3_fs = s3fs.S3FileSystem(\n key=creds['aws_access_key_id'],\n secret=creds['aws_secret_access_key'],\n token=creds['aws_session_token'],\n client_kwargs={'region_name':'us-west-2'},\n)\nf = s3_fs.open(url, mode='rb')\nds = xr.open_dataset(f)\nds.analysed_sst.plot()\nhome_dir = os.path.expanduser('~')\nplt.savefig(os.path.join(home_dir, 'plot2.png'))", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/dadwunxuogt/s3_file_storage.py\", line 8, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686761487968, | ||
| "history_end_time" : 1686761488098, | ||
| "history_notes" : null, | ||
| "history_process" : "1b4ko0", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| }] |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,41 @@ | ||
| [{ | ||
| "history_id" : "p6977t6u1vo", | ||
| "history_input" : "\n\n\n# Suppress warnings\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/p6977t6u1vo/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759148585, | ||
| "history_end_time" : 1686759148955, | ||
| "history_notes" : null, | ||
| "history_process" : "wttkvt", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "3l2y4206qef", | ||
| "history_input" : "from earth_data_utils import *\n\nssh_short_name = \"SEA_SURFACE_HEIGHT_ALT_GRIDS_L4_2SATS_5DAY_6THDEG_V_JPL2205\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/3l2y4206qef/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/3l2y4206qef/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759150591, | ||
| "history_end_time" : 1686759150744, | ||
| "history_notes" : null, | ||
| "history_process" : "yvo1ds", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "74iyqhnh28j", | ||
| "history_input" : "from search_data import *\n\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)\n\nauth = earthaccess.login(strategy=\"netrc\", persist=True)\nds = xr.open_mfdataset(earthaccess.open(results))\ngeojson_path = '/home/jovyan/gulf.json'\ngdf = gpd.read_file(geojson_path) #Return a GeoDataFrame object\n\n\nharmony_client = Client()\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nrequest = Request(\n collection=Collection(id=sst_short_name),\n shape=geojson_path,\n temporal={\n 'start': dt.datetime(2021, 8, 1, 1),\n 'stop': dt.datetime(2021, 8, 1, 2) \n },\n)\njob_id = harmony_client.submit(request)\nharmony_client.wait_for_processing(job_id, show_progress=False)\ndata = harmony_client.result_json(job_id)\nresults = harmony_client.result_urls(job_id, link_type=LinkType.s3)\nurls = list(results)\nurl = urls[0]\n", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/74iyqhnh28j/earth_access_authenticate.py\", line 1, in <module>\n from search_data import *\n File \"/Users/joe/gw-workspace/74iyqhnh28j/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/74iyqhnh28j/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759152006, | ||
| "history_end_time" : 1686759152136, | ||
| "history_notes" : null, | ||
| "history_process" : "cgvhiy", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "uu96597mlq0", | ||
| "history_input" : "# Suppress warnings\nimport os\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs\nimport matplotlib.pyplot as plt\nfrom earth_access_authenticate import *\n\ncreds = harmony_client.aws_credentials()\ns3_fs = s3fs.S3FileSystem(\n key=creds['aws_access_key_id'],\n secret=creds['aws_secret_access_key'],\n token=creds['aws_session_token'],\n client_kwargs={'region_name':'us-west-2'},\n)\nf = s3_fs.open(url, mode='rb')\nds = xr.open_dataset(f)\nds.analysed_sst.plot()\nhome_dir = os.path.expanduser('~')\nplt.savefig(os.path.join(home_dir, 'plot2.png'))", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/uu96597mlq0/s3_file_storage.py\", line 8, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759153783, | ||
| "history_end_time" : 1686759153919, | ||
| "history_notes" : null, | ||
| "history_process" : "1b4ko0", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| }] |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,41 @@ | ||
| [{ | ||
| "history_id" : "qrdgeq35rzb", | ||
| "history_input" : "\n\n\n# Suppress warnings\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/qrdgeq35rzb/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759076017, | ||
| "history_end_time" : 1686759076500, | ||
| "history_notes" : null, | ||
| "history_process" : "wttkvt", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "g1k064wc7gb", | ||
| "history_input" : "from earth_data_utils import *\n\nssh_short_name = \"SEA_SURFACE_HEIGHT_ALT_GRIDS_L4_2SATS_5DAY_6THDEG_V_JPL2205\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/g1k064wc7gb/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/g1k064wc7gb/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759078023, | ||
| "history_end_time" : 1686759078172, | ||
| "history_notes" : null, | ||
| "history_process" : "yvo1ds", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "p0kx8wg6123", | ||
| "history_input" : "from search_data import *\n\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nresults = earthaccess.search_data(\n short_name=ssh_short_name,\n cloud_hosted=True,\n temporal=(\"2021-07-01\", \"2021-09-30\"),\n)\n\nauth = earthaccess.login(strategy=\"netrc\", persist=True)\nds = xr.open_mfdataset(earthaccess.open(results))\ngeojson_path = '/home/jovyan/gulf.json'\ngdf = gpd.read_file(geojson_path) #Return a GeoDataFrame object\n\n\nharmony_client = Client()\nsst_short_name=\"MUR-JPL-L4-GLOB-v4.1\"\n\nrequest = Request(\n collection=Collection(id=sst_short_name),\n shape=geojson_path,\n temporal={\n 'start': dt.datetime(2021, 8, 1, 1),\n 'stop': dt.datetime(2021, 8, 1, 2) \n },\n)\njob_id = harmony_client.submit(request)\nharmony_client.wait_for_processing(job_id, show_progress=False)\ndata = harmony_client.result_json(job_id)\nresults = harmony_client.result_urls(job_id, link_type=LinkType.s3)\nurls = list(results)\nurl = urls[0]\n", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/p0kx8wg6123/earth_access_authenticate.py\", line 1, in <module>\n from search_data import *\n File \"/Users/joe/gw-workspace/p0kx8wg6123/search_data.py\", line 1, in <module>\n from earth_data_utils import *\n File \"/Users/joe/gw-workspace/p0kx8wg6123/earth_data_utils.py\", line 10, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759079549, | ||
| "history_end_time" : 1686759079701, | ||
| "history_notes" : null, | ||
| "history_process" : "cgvhiy", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| },{ | ||
| "history_id" : "680j43ov10s", | ||
| "history_input" : "# Suppress warnings\nimport os\nimport warnings\nwarnings.simplefilter('ignore')\nwarnings.filterwarnings('ignore')\n\n# Direct access\nimport earthaccess \nfrom pprint import pprint\nimport xarray as xr\n\n# Harmony\nimport geopandas as gpd\nimport geoviews as gv\ngv.extension('bokeh', 'matplotlib')\nfrom harmony import BBox, Client, Collection, Request, LinkType\nimport datetime as dt\nimport s3fs\nimport matplotlib.pyplot as plt\nfrom earth_access_authenticate import *\n\ncreds = harmony_client.aws_credentials()\ns3_fs = s3fs.S3FileSystem(\n key=creds['aws_access_key_id'],\n secret=creds['aws_secret_access_key'],\n token=creds['aws_session_token'],\n client_kwargs={'region_name':'us-west-2'},\n)\nf = s3_fs.open(url, mode='rb')\nds = xr.open_dataset(f)\nds.analysed_sst.plot()\nhome_dir = os.path.expanduser('~')\nplt.savefig(os.path.join(home_dir, 'plot2.png'))", | ||
| "history_output" : "Traceback (most recent call last):\n File \"/Users/joe/gw-workspace/680j43ov10s/s3_file_storage.py\", line 8, in <module>\n import earthaccess \nModuleNotFoundError: No module named 'earthaccess'\n", | ||
| "history_begin_time" : 1686759081222, | ||
| "history_end_time" : 1686759081357, | ||
| "history_notes" : null, | ||
| "history_process" : "1b4ko0", | ||
| "host_id" : "100001", | ||
| "indicator" : "Failed" | ||
| }] |
Binary file not shown.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters