Merge pull request #22 from dynamicslab/14-validate-examples

run notebooks on pull request

.github/workflows/examples.yml

@@ -0,0 +1,31 @@
+name: Check Examples
+
+on: [pull_request]
+
+jobs:
+  run:
+    runs-on: ubuntu-latest
+    strategy:
+      max-parallel: 4
+      matrix:
+        python-version: [3.6, 3.7, 3.8]
+    steps:
+    - uses: actions/checkout@v1
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v1
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install dependencies
+      run: |
+        pip install -r requirements-dev.txt
+        pip install papermill
+    - name: Execute notebooks with papermill
+      run: |
+        cd example
+        for nb in *.ipynb; do papermill --report-mode $nb out.json; done
+    - uses: actions/cache@v1
+      with:
+        path: ~/.cache/pip
+        key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements-dev.txt') }}
+        restore-keys: |
+          ${{ runner.os }}-pip-

.github/workflows/pythonpackage.yml

@@ -19,15 +19,13 @@ jobs:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
-        python -m pip install --upgrade pip
         pip install -r requirements-dev.txt
     - name: Test with pytest
       run: |
-        pip install pytest
         py.test test --cov=sindy --flake8
     - uses: actions/cache@v1
       with:
         path: ~/.cache/pip
-        key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }}
+        key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements-dev.txt') }}
         restore-keys: |
           ${{ runner.os }}-pip-

requirements-dev.txt

@@ -9,3 +9,5 @@ flake8-builtins-unleashed
 codecov
 setuptools_scm
 setuptools_scm_git_archive
+jupyter
+notebook