Update license.

Signed-off by: David Rowenhorst <[email protected]>

License

@@ -18,5 +18,5 @@ works bear some notice that they are derived from it, and any modified versions
 some notice that they have been modified.
 
 Author: David Rowenhorst; 
-The US Naval Research Laboratory Date: 21 Aug 2020
+The US Naval Research Laboratory Date: 22 May 2024
 

pyebsdindex/_ebsd_index_single.py

@@ -18,7 +18,14 @@
 # some notice that they have been modified.
 #
 # Author: David Rowenhorst;
-# The US Naval Research Laboratory Date: 21 Aug 2020
+# The US Naval Research Laboratory Date: 22 May 2024
+
+# For further information see:
+# David J. Rowenhorst, Patrick G. Callahan, Håkon W. Ånes. Fast Radon transforms for
+# high-precision EBSD orientation determination using PyEBSDIndex.
+# Journal of Applied Crystallography, 57(1):3–19, 2024.
+# DOI: 10.1107/S1600576723010221
+
 
 """Setup and handling of Radon indexing runs of EBSD patterns on a
 single thread.

pyebsdindex/band_detect.py

@@ -1,24 +1,35 @@
-"""This software was developed by employees of the US Naval Research Laboratory (NRL), an
-agency of the Federal Government. Pursuant to title 17 section 105 of the United States
-Code, works of NRL employees are not subject to copyright protection, and this software
-is in the public domain. PyEBSDIndex is an experimental system. NRL assumes no
-responsibility whatsoever for its use by other parties, and makes no guarantees,
-expressed or implied, about its quality, reliability, or any other characteristic. We
-would appreciate acknowledgment if the software is used. To the extent that NRL may hold
-copyright in countries other than the United States, you are hereby granted the
-non-exclusive irrevocable and unconditional right to print, publish, prepare derivative
-works and distribute this software, in any medium, or authorize others to do so on your
-behalf, on a royalty-free basis throughout the world. You may improve, modify, and
-create derivative works of the software or any portion of the software, and you may copy
-and distribute such modifications or works. Modified works should carry a notice stating
-that you changed the software and should note the date and nature of any such change.
-Please explicitly acknowledge the US Naval Research Laboratory as the original source.
-This software can be redistributed and/or modified freely provided that any derivative
-works bear some notice that they are derived from it, and any modified versions bear
-some notice that they have been modified.
-
-Author: David Rowenhorst;
-The US Naval Research Laboratory Date: 21 Aug 2020"""
+# This software was developed by employees of the US Naval Research Laboratory (NRL), an
+# agency of the Federal Government. Pursuant to title 17 section 105 of the United States
+# Code, works of NRL employees are not subject to copyright protection, and this software
+# is in the public domain. PyEBSDIndex is an experimental system. NRL assumes no
+# responsibility whatsoever for its use by other parties, and makes no guarantees,
+# expressed or implied, about its quality, reliability, or any other characteristic. We
+# would appreciate acknowledgment if the software is used. To the extent that NRL may hold
+# copyright in countries other than the United States, you are hereby granted the
+# non-exclusive irrevocable and unconditional right to print, publish, prepare derivative
+# works and distribute this software, in any medium, or authorize others to do so on your
+# behalf, on a royalty-free basis throughout the world. You may improve, modify, and
+# create derivative works of the software or any portion of the software, and you may copy
+# and distribute such modifications or works. Modified works should carry a notice stating
+# that you changed the software and should note the date and nature of any such change.
+# Please explicitly acknowledge the US Naval Research Laboratory as the original source.
+# This software can be redistributed and/or modified freely provided that any derivative
+# works bear some notice that they are derived from it, and any modified versions bear
+# some notice that they have been modified.
+#
+#
+# Author: David Rowenhorst;
+# The US Naval Research Laboratory Date: 22 May 2024
+#
+# For further information see:
+# David J. Rowenhorst, Patrick G. Callahan, Håkon W. Ånes. Fast Radon transforms for
+# high-precision EBSD orientation determination using PyEBSDIndex.
+# Journal of Applied Crystallography, 57(1):3–19, 2024.
+# DOI: 10.1107/S1600576723010221
+#
+#
+
+"""Class that reads in EBSD patterns, and finds the bands within those patterns using a Radon Transform."""
 
 #from os import environ
 import os

pyebsdindex/crystallometry.py

@@ -1,28 +1,28 @@
-'''This software was developed by employees of the US Naval Research Laboratory (NRL), an
-agency of the Federal Government. Pursuant to title 17 section 105 of the United States
-Code, works of NRL employees are not subject to copyright protection, and this software
-is in the public domain. PyEBSDIndex is an experimental system. NRL assumes no
-responsibility whatsoever for its use by other parties, and makes no guarantees,
-expressed or implied, about its quality, reliability, or any other characteristic. We
-would appreciate acknowledgment if the software is used. To the extent that NRL may hold
-copyright in countries other than the United States, you are hereby granted the
-non-exclusive irrevocable and unconditional right to print, publish, prepare derivative
-works and distribute this software, in any medium, or authorize others to do so on your
-behalf, on a royalty-free basis throughout the world. You may improve, modify, and
-create derivative works of the software or any portion of the software, and you may copy
-and distribute such modifications or works. Modified works should carry a notice stating
-that you changed the software and should note the date and nature of any such change.
-Please explicitly acknowledge the US Naval Research Laboratory as the original source.
-This software can be redistributed and/or modified freely provided that any derivative
-works bear some notice that they are derived from it, and any modified versions bear
-some notice that they have been modified.
-
-This borrows heavily from Marc De Graef's EMsoft package. Many functions here
-are Python translations of functions from it.
-
-
-Author: David Rowenhorst, Patrick Callahan;
-The US Naval Research Laboratory Date: 21 Aug 2020'''
+# This software was developed by employees of the US Naval Research Laboratory (NRL), an
+# agency of the Federal Government. Pursuant to title 17 section 105 of the United States
+# Code, works of NRL employees are not subject to copyright protection, and this software
+# is in the public domain. PyEBSDIndex is an experimental system. NRL assumes no
+# responsibility whatsoever for its use by other parties, and makes no guarantees,
+# expressed or implied, about its quality, reliability, or any other characteristic. We
+# would appreciate acknowledgment if the software is used. To the extent that NRL may hold
+# copyright in countries other than the United States, you are hereby granted the
+# non-exclusive irrevocable and unconditional right to print, publish, prepare derivative
+# works and distribute this software, in any medium, or authorize others to do so on your
+# behalf, on a royalty-free basis throughout the world. You may improve, modify, and
+# create derivative works of the software or any portion of the software, and you may copy
+# and distribute such modifications or works. Modified works should carry a notice stating
+# that you changed the software and should note the date and nature of any such change.
+# Please explicitly acknowledge the US Naval Research Laboratory as the original source.
+# This software can be redistributed and/or modified freely provided that any derivative
+# works bear some notice that they are derived from it, and any modified versions bear
+# some notice that they have been modified.
+#
+# This borrows heavily from Marc De Graef's EMsoft package. Many functions here
+# are Python translations of functions from it.
+#
+#
+# Author: David Rowenhorst, Patrick Callahan;
+# The US Naval Research Laboratory Date: 22 May 2024
 
 
 import numpy as np

pyebsdindex/misorientation.py

@@ -1,40 +1,33 @@
-'''
-2022, David Rowenhorst/The US Naval Research Laboratory, Washington DC
-# Pursuant to title 17 section 105 of the United States Code, works of US Governement employees
-# are not not subject to copyright protection.
+# This software was developed by employees of the US Naval Research Laboratory (NRL), an
+# agency of the Federal Government. Pursuant to title 17 section 105 of the United States
+# Code, works of NRL employees are not subject to copyright protection, and this software
+# is in the public domain. PyEBSDIndex is an experimental system. NRL assumes no
+# responsibility whatsoever for its use by other parties, and makes no guarantees,
+# expressed or implied, about its quality, reliability, or any other characteristic. We
+# would appreciate acknowledgment if the software is used. To the extent that NRL may hold
+# copyright in countries other than the United States, you are hereby granted the
+# non-exclusive irrevocable and unconditional right to print, publish, prepare derivative
+# works and distribute this software, in any medium, or authorize others to do so on your
+# behalf, on a royalty-free basis throughout the world. You may improve, modify, and
+# create derivative works of the software or any portion of the software, and you may copy
+# and distribute such modifications or works. Modified works should carry a notice stating
+# that you changed the software and should note the date and nature of any such change.
+# Please explicitly acknowledge the US Naval Research Laboratory as the original source.
+# This software can be redistributed and/or modified freely provided that any derivative
+# works bear some notice that they are derived from it, and any modified versions bear
+# some notice that they have been modified.
 #
-# Copyright (c) 2013-2014, Marc De Graef/Carnegie Mellon University
-# All rights reserved.
 #
-# Redistribution and use in source and binary forms, with or without modification, are
-# permitted provided that the following conditions are met:
+# Author: David Rowenhorst;
+# The US Naval Research Laboratory Date: 22 May 2024
 #
-#     - Redistributions of source code must retain the above copyright notice, this list
-#        of conditions and the following disclaimer.
-#     - Redistributions in binary form must reproduce the above copyright notice, this
-#        list of conditions and the following disclaimer in the documentation and/or
-#        other materials provided with the distribution.
-#     - Neither the names of Marc De Graef, Carnegie Mellon University nor the names
-#        of its contributors may be used to endorse or promote products derived from
-#        this software without specific prior written permission.
+# For further information see:
+# David J. Rowenhorst, Patrick G. Callahan, Håkon W. Ånes. Fast Radon transforms for
+# high-precision EBSD orientation determination using PyEBSDIndex.
+# Journal of Applied Crystallography, 57(1):3–19, 2024.
+# DOI: 10.1107/S1600576723010221
 #
-# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
-# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
-# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
-# DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
-# SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
-# CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
-# OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE
-# USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-####################################################################################################
-
-
-#Author David Rowenhorst/The US Naval Research Laboratory, Washington DC
 #
-#
-'''
 
 import numpy as np
 import numba