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1. mafTools mafTools Public

   Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.

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2. simpleHilbertCurve simpleHilbertCurve Public

   Script to plot 1D data in 2D using the Hilbert Curve. Honestly a pretty terrible visualization technique for conveying information, but it looks cool.

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3. structureHarvester structureHarvester Public

   Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.

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4. quick_plot quick_plot Public

   quick_plot is a python program that plots one or two column flat files from the command line.

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5. evolverSimControl evolverSimControl Public

   jobTree based python wrapper to run the genome simulation tool suite Evolver

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6. assemblAnalysis assemblAnalysis Public

   Analysis scripts to generate Tables and Figures for Assemblathon 1

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