Closed-loop model of the cardiovascular system with autonomic regulation. No fancy frills for interactive sessions yet (i.e., running a case requires manual changes to the vascularmain.jl script). To install:
Pkg.clone("git://github.com/dcanuto/CVModule.git")
After installation, open the vascularmain.jl script and set options:
rstflag = "yes" # (or "no")
hemoflag = "yes"
saveflag = "yes"
The above flags set whether or not to restart (in which case the filename variable must be set to the name of the restart file), to hemorrhage (set to perform a 10% hemorrhage and tourniquet application at the left femoral artery), and to save the solution to a restart file. For the last option, the restart file's name is set in the call to matopen near the end of the function, and can be edited as desired:
file = MAT.matopen("savefile.mat", "w")
To run a case for N cardiac cycles, set the keyword argument numbeatstotal in the call to the solution initialization function within vascularmain.jl:
system = CVModule.buildall(filename;numbeatstotal=N,restart=rstflag,injury=hemoflag);
With the above options set, build the vascularmain.jl script. To do so from the Julia REPL:
include("path/to/vascularmain.jl")
Then run a case for n time steps from the REPL:
system, n = main();