(analysis_dustformation) analysis routine to compute time of dust formation #1830
Workflow file for this run
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| name: build | |
| on: | |
| push: | |
| branches: [ master ] | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'README.md' | |
| pull_request: | |
| branches: [ master ] | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'README.md' | |
| # schedule: | |
| # - cron: "0 0 * * *" | |
| env: | |
| OMP_STACKSIZE: 512M | |
| SPLASH_DIR: ${{ github.workspace }}/splash | |
| PHANTOM_DIR: ${{ github.workspace }} | |
| WEB_USER: github | |
| WEB_SERVER: data.phantom.cloud.edu.au | |
| WEB_HTML_DIR: /var/www/html | |
| BUILD_LOG_DIR: /ci/build/logs | |
| RSYNC_RSH: ssh -o "StrictHostKeyChecking=no" -o "UserKnownHostsFile=/dev/null" | |
| NPARALLEL: 32 | |
| jobs: | |
| matrix_prep: | |
| # Skip scheduled runs on forks | |
| if: ${{ github.event_name != 'schedule' || github.repository == 'danieljprice/phantom' }} | |
| runs-on: ubuntu-latest | |
| outputs: | |
| batch: ${{ steps.set-sequence.outputs.batch }} | |
| nbatch: ${{ steps.set-sequence.outputs.nbatch }} | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v3 | |
| - name: Generate sequence of batch numbers for normal tests, or run sequentially for scheduled tests | |
| id: set-sequence | |
| run: | | |
| if [[ ${{ github.event_name == 'schedule' }} ]]; then | |
| range=$(jq -ncR "[range(1;${NPARALLEL}+1)]") | |
| echo "::set-output name=batch::${range}" | |
| echo "::set-output name=nbatch::${NPARALLEL}" | |
| else | |
| echo "::set-output name=batch::[1]" | |
| echo "::set-output name=nbatch::1" | |
| fi | |
| build: | |
| needs: matrix_prep | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| system: | |
| - gfortran | |
| - ifort | |
| batch: ${{ fromJson(needs.matrix_prep.outputs.batch) }} | |
| name: build (batch ${{ matrix.batch }}/${{ needs.matrix_prep.outputs.nbatch }}, SYSTEM=${{ matrix.system }}) | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: "Nuke the github workspace before doing anything" | |
| run: rm -r ${{ github.workspace }} && mkdir ${{ github.workspace }} | |
| - name: Update package list | |
| run: sudo apt-get update | |
| - name: Setup Intel repo | |
| if: matrix.system == 'ifort' | |
| id: intel-repo | |
| run: | | |
| wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list | |
| sudo apt-get update | |
| INTELVERSION=$(apt-cache show intel-oneapi-compiler-fortran | grep Version | head -1) | |
| echo "::set-output name=intelversion::$INTELVERSION" | |
| - name: Cache intel installation | |
| if: matrix.system == 'ifort' | |
| id: cache-intel | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| /opt/intel | |
| key: ${{ steps.intel-repo.outputs.intelversion }} | |
| - name: Install Intel compilers | |
| if: ${{ steps.cache-intel.outputs.cache-hit != 'true' && matrix.system == 'ifort' }} | |
| run: | | |
| sudo apt-get install -y intel-oneapi-common-vars | |
| sudo apt-get install -y intel-oneapi-compiler-fortran | |
| sudo apt-get install -y intel-oneapi-mpi | |
| sudo apt-get install -y intel-oneapi-mpi-devel | |
| - name: Setup Intel oneAPI environment | |
| if: matrix.system == 'ifort' | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| printenv >> $GITHUB_ENV | |
| - name: Install numpy and matplotlib for analysis unit tests | |
| run: | | |
| sudo apt-get install -y python3-numpy | |
| sudo apt-get install -y python3-matplotlib | |
| - name: "Clone phantom" | |
| uses: actions/checkout@v3 | |
| - name: "Grab a copy of splash source code" | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: danieljprice/splash | |
| path: splash | |
| - name: "Create logs directory" | |
| if: github.event_name == 'schedule' | |
| run: mkdir logs | |
| # - name: "Grab previous build logs from web server" | |
| # if: github.event_name == 'schedule' | |
| # env: | |
| # WGET: wget --recursive --no-parent --reject "index.html*" --cut-dirs=2 --no-host-directories | |
| # run: ${WGET} -A '*${{ matrix.system[1] }}.txt' http://${WEB_SERVER}${BUILD_LOG_DIR}/ || true | |
| - name: "Run buildbot.sh" | |
| run: ./buildbot.sh --maxdim 17000000 --url http://${WEB_SERVER}/${BUILD_LOG_DIR} --parallel ${{ matrix.batch }} ${{ env.NPARALLEL }} | |
| working-directory: scripts | |
| env: | |
| SYSTEM: ${{ matrix.system }} | |
| RETURN_ERR: yes | |
| # - name: "Install SSH Key" | |
| # if: github.event_name == 'schedule' | |
| # uses: webfactory/[email protected] | |
| # with: | |
| # ssh-private-key: ${{ secrets.RUNNER_PRIVATE_KEY }} | |
| # - name: "Copy new build logs to web server" | |
| # if: ${{ (success() || failure()) && github.event_name == 'schedule' }} | |
| # run: rsync -vau logs/*.txt ${WEB_USER}@${WEB_SERVER}:${WEB_HTML_DIR}/${BUILD_LOG_DIR} | |
| # - name: "Copy HTML files to web server" | |
| # if: ${{ (success() || failure()) && github.event_name == 'schedule' }} | |
| # run: | | |
| # export WEB_BUILD_DIR=${WEB_HTML_DIR}/nightly/build/$(date "+%Y%m%d") | |
| # ssh -o "StrictHostKeyChecking=no" -o "UserKnownHostsFile=/dev/null" ${WEB_USER}@${WEB_SERVER} -- mkdir -p ${WEB_BUILD_DIR} | |
| # rsync -vau logs/*.html ${WEB_USER}@${WEB_SERVER}:${WEB_BUILD_DIR}/ | |
| - name: logs/build-failures-${{ matrix.system }}.txt | |
| if: always() | |
| run: cat logs/build-failures-${{ matrix.system }}.txt || true | |
| - name: logs/setup-failures-${{ matrix.system }}.txt | |
| if: always() | |
| run: cat logs/setup-failures-${{ matrix.system }}.txt || true | |
| - name: logs/analysis-failures-${{ matrix.system }}.txt | |
| if: always() | |
| run: cat logs/analysis-failures-${{ matrix.system }}.txt || true | |
| - name: logs/make-*-${{ matrix.system }}.txt | |
| if: always() | |
| run: | | |
| echo | |
| for item in $(ls logs/make-*-${{ matrix.system }}.txt); do | |
| echo ::group::"${item}" | |
| cat $item | |
| echo ::endgroup:: | |
| done | |
| # Gather results into a dummy job that will fail if the previous job fails | |
| gather_results: | |
| if: ${{ always() && github.event_name != 'schedule' }} | |
| needs: | |
| - build | |
| # This name matches the branch protection requirement | |
| name: build | |
| # Always run on github runner; no need to use custom runner for the check | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check all builds succeeded | |
| run: | | |
| if [[ "${{ needs.build.result }}" == "success" ]]; then | |
| echo "All build succeeded" | |
| else | |
| echo "At least one build failed" | |
| exit 1 | |
| fi |