Deterministic algorithm to compute exact p values for TFBS motifs in the genome.
Computes p values using methodology of Tan et al (https://cran.r-project.org/web/packages/TFMPvalue/TFMPvalue.pdf), with code rewritten to be vectorized for efficiency.
Computationally outperforms TFMPvalue in calculation of exact p values for large number of motifs.
-
Notifications
You must be signed in to change notification settings - Fork 0
danielcgingerich/calculate_motif_p_values
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
No description, website, or topics provided.
Resources
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published