Added openjdk docker container

daisybio · Dec 7, 2023 · 86cd8c9 · 86cd8c9
1 parent 60a6bc9
commit 86cd8c9
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/modules/local/chromhmm/binarize_bams.nf b/modules/local/chromhmm/binarize_bams.nf
@@ -1,6 +1,6 @@
 process BINARIZE_BAMS {
 
-	//TODO: Check if java container needed
+	container "docker://openjdk:17.0.1-jdk"
 
     input:
     path cellmarkfiletable

diff --git a/modules/local/chromhmm/learn_model.nf b/modules/local/chromhmm/learn_model.nf
@@ -1,6 +1,6 @@
 process LEARN_MODEL {
 
-	//TODO: Check if java container needed
+	container "docker://openjdk:17.0.1-jdk"
 
     input:
     path binarized_bams