🐳 create docker for toolkit python libraries (#254)

* 🐳 create docker for toolkit python libraries * update docker table (#255) Co-authored-by: sickler-alex <[email protected]> --------- Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: sickler-alex <[email protected]>
d3b-center · Dec 11, 2024 · 3683e20 · 3683e20
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diff --git a/README.md b/README.md
@@ -178,6 +178,7 @@ THetA2|0.7.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/theta2:0.7.0
 THetA2|0.7.1|docker pull pgc-images.sbgenomics.com/d3b-bixu/theta2:0.7.1
 tidyverse|3.6.1-canine-util|docker pull pgc-images.sbgenomics.com/d3b-bixu/tidyverse:3.6.1-canine-util
 toolkit_immune_deconvolution|1.0.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/toolkit_immune_deconvolution:1.0.0
+toolkit_python|3.0.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/toolkit_python:3.0.0
 toolkit_subtyping|4.1.0R|docker pull pgc-images.sbgenomics.com/d3b-bixu/toolkit_subtyping:4.1.0R
 toolkit_subtyping|pyreader0.4.4|docker pull pgc-images.sbgenomics.com/d3b-bixu/toolkit_subtyping:pyreader0.4.4
 toolkit_subtyping|subtyping_v1.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/toolkit_subtyping:subtyping_v1.0

diff --git a/toolkit_python/3.0.0/Dockerfile b/toolkit_python/3.0.0/Dockerfile
@@ -0,0 +1,7 @@
+FROM python:3.13.1-slim
+LABEL maintainer="Alex Sickler ([email protected])"
+LABEL description="Python3 base with all packages needed for toolkit analysis modules."
+
+RUN apt update && python -m pip install --upgrade pip && python -m pip install pandas click
+
+COPY Dockerfile .