Monthly Docker Build Validation #15

Run time

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Job	Run time
Get Changed Dockerfiles Matrix	3s
Build BIC-seq2/0.7.2	52s
Build FusionAnnotator/0.1.1	59s
Build FusionCatcher/latest	1m 38s
Build LOH/1.0.0	5m 43s
Build LOH/1.0.1	7m 49s
Build LinkedSV/latest	51s
Build PureCN	12m 43s
Build SVTyper/0.7.1	1m 37s
Build THetA2/0.7.1	1m 56s
Build THetA2/0.7.0	1m 34s
Build VEP/r98	4m 46s
Build VEP/r94	4m 39s
Build VEP/r93.7	4m 24s
Build VEP/r93_v2	3m 42s
Build VEP/r93	4m 16s
Build VarDictJava/1.7.0	1m 20s
Build VarDictJava/fp_filter	39s
Build VarDictJava/1.5.8	1m 16s
Build WGSA	3m 48s
Build add-strelka2-fields/1.0.0	2m 38s
Build annoFuse/0.90.0	29s
Build annoFuse/0.92.0	10m 37s
Build annoFuse/0.91.0	11m 38s
Build annotsv/3.1.1	2m 59s
Build annovar/latest	12s
Build arriba/latest	3m 24s
Build arriba/1.0.1	3m 16s
Build arriba/1.1.0	3m 33s
Build arriba/2.2.1	47s
Build autopvs1/v1.0.1	1m 25s
Build autopvs1/v2.0.0	2m 50s
Build bcbio/variation_recall-0.2.4	57s
Build bed_tools/bedopsv2.4.36_plus_bedtools	22s
Build bvcftools	20s
Build bwa/latest	22s
Build bwa/0.7.15-r1140	23s
Build bwa/0.7.17-r1188	25s
Build bwa-bundle/0.1.17	1m 1s
Build bwa-picard/latest	33s
Build bwa-picard/broad	33s
Build bwa-samtools	1m 18s
Build canvas/1.11.0	59s
Build cellranger/6.1.2	1m 8s
Build cellranger/5.0	2m 14s
Build cellranger/3.1	1m 58s
Build cellranger/6.0	1m 45s
Build cnvnator/v0.4.1	2m 46s
Build codex2/3.8	10m 40s
Build consensus-merge/1.0.0	6m 1s
Build consensus-merge/1.1.0	6m 5s
Build controlfreec/11.5	3m 36s
Build cutadapt/latest	43s
Build cutadapt/3.4	37s
Build cutesv/1.0.13	1m 8s
Build cutesv/2.0.3	55s
Build echtvar/0.2.0	57s
Build echtvar/0.1.9	49s
Build echtvar/0.2.0-rc	11m 52s
Build fastqc/v0.11.9	1m 42s
Build freebayes/v1.3.2	22s
Build freebayes/v1.3.1	23s
Build gatk/4.beta.6	31s
Build gatk/3.5-0-g36282e4	22s
Build gatk/latest	23s
Build gatk/4.beta.1-3.5	25s
Build gatk/4.beta.5	18s
Build gatk/4.1.7.0R	1m 21s
Build gatk/4.beta.5-tabix	25s
Build gatk/4.1.1.0	1m 16s
Build gatk/3.8_ubuntu	1m 27s
Build gatk/3.6-0-g89b7209	10s
Build gatk/4.0.12.0	2m 35s
Build gatk/4.0.1.2	26s
Build gatk/3.8	17s
Build gatk/4.0.5.2	1m 1s
Build gatk/4.2.0.0R	1m 23s
Build gatk/4.beta.1	28s
Build gatk/4.0.1.0	20s
Build gatk/4.beta.6-tabix	33s
Build gatk-picard/4.beta.1-2.8.3	36s
Build gatk-picard/4.0.1.2-2.8.3	30s
Build gistic	2m 4s
Build hisat2/2.2.1	28s
Build hotspots/0.1.0	1m 4s
Build intervar/v2.2.1	1m 8s
Build isoseq/v4.0.0	21s
Build kf_vcf2maf/v1.0.1	3m 13s
Build kf_vcf2maf/v1.0.0	20s
Build kf_vcf2maf/v1.0.3	2m 42s
Build kf_vcf2maf/v1.0.2	2m 37s
Build lancet/1.1.x	2m 12s
Build lancet/1.0.7	2m 11s
Build lima/v2.9.0	26s
Build loompy/2.0.16	40s
Build lumpy-sv/0.2.13	47s
Build lumpy-sv/0.3.0	3m 14s
Build manta/1.6.0	27s
Build manta/1.4	34s
Build mend_qc	56s
Build minimap2/v2.28	36s
Build msisensor/1.1.a	1m 21s
Build nanocount/v1.1.0	3m 55s
Build ngscheckmate/1.3	2m 6s
Build octopus/0.6.3-beta	32m 22s
Build pbta-splicing/0.1	37m 19s
Build peddy/v0.4.7	1m 13s
Build peddy/v0.4.2	2m 5s
Build phlat/1.0.0	2m 42s
Build picard/2.18.9	1m 13s
Build picard/latest	14s
Build picard/2.18.9R	1m 1s
Build picard/2.17.4	11s
Build picard/2.15.0	10s
Build picard/2.14.0	16s
Build picard/2.8.3	14s
Build picard-r/picard2.8.3-r3.3.3	16s
Build picard-r/picard2.15.0-r.3.3.3	20s
Build pigeon/v1.2.0	19s
Build pizzly/latest	58s
Build plink/1.90b7.2	18s
Build pypy/3	11m 29s
Build pyspark/3.1.2	1m 25s
Build python/3.9-canine-util	1m 0s
Build python/2.7.13	14s
Build sambamba/0.7.1	19s
Build sambamba/0.6.3	28s
Build samtools/latest	58s
Build samtools/1.9	1m 31s
Build samtools/1.3.1	48s
Build samtools/1.7-11-g041220d	1m 31s
Build samtools/1.15.1	2m 10s
Build samtools/1.6	53s
Build sanger/caveman-pindel/latest	4m 13s
Build scRNA_qc/v1.0.1	2m 55s
Build scRNA_qc/v1.0.0	20m 57s
Build scRNA_qc/v1.1.0	12m 11s
Build scdblfinder/v1.12.0	11m 0s
Build scdblfinder/1.8.0	1m 13s
Build scrublet/0.2.3	1m 26s
Build sentieon/202112.01_hifi	3m 21s
Build seqkit/2.3.1	37s
Build sequenza/3.0.0	30s
Build seurat/latest	36s
Build smoove/0.2.5	4m 40s
Build sniffles/2.0.3	44s
Build sniffles/2.0.7	1m 9s
Build snpEff/4.3t	48s
Build snpEff	53s
Build soupx_R/1.6.2	11m 25s
Build soupx_R/4.1.0_SoupX	51m 25s
Build speedseq/latest	42s
Build star/2.7.11a	18s
Build star/2.7.5a	18s
Build star/fusion-1.10.1	14m 49s
Build star/2.7.10b	24s
Build star/fusion-1.5.0	3m 2s
Build star/2.6.1d	18s
Build star/2.7.10a	24s
Build stranded/1.0.0	1m 0s
Build stranded/1.1.0	1m 8s
Build strelka/v2.9.10	58s
Build supremo/1.0.0	6m 15s
Build sv2/latest	38s
Build svaba/1.1.0	4m 25s
Build t1k/v1.0.5	1m 3s
Build t1k/v1.0.2	58s
Build tidyverse/3.6.1-canine-util	38s
Build toolkit_immune_deconvolution/1.0.0	26m 2s
Build toolkit_subtyping/4.1.0R	45m 26s
Build toolkit_subtyping/subtyping_v1.0	59m 4s
Build toolkit_subtyping/subtyping_v1.1	1h 2m 0s
Build toolkit_subtyping/pyreader0.4.4	45m 15s
Build toolkit_subtyping/subtyping_v2.0	48m 36s
Build toolkit_tmb/1.0.0	6m 9s
Build tumor-only-benchmarking/1.0.0	4m 10s
Build vcf_utils	42s
Build velocyto/0.17.17	4m 43s
Build verifybamid/1.0.2	2m 45s
Build verifybamid/latest	2m 40s
Build verifybamid/1.0.1	2m 50s
Build zumis/2.9.4	2m 43s
	13h 23m 49s

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Monthly Docker Build Validation #15

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Monthly Docker Build Validation #15

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