Monthly Docker Build Validation #14
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1 error and 1 warning
Test Build Dockerfile
buildx failed with: ERROR: failed to solve: process "/bin/sh -c apt update && apt install -y build-essential apt-utils autoconf git cmake python curl libz-dev libtbb-dev libncurses5-dev bsdmainutils gawk libbz2-dev liblzma-dev libcurl4-openssl-dev libssl-dev && curl https://bootstrap.pypa.io/get-pip.py -o get-pip.py && python get-pip.py && rm get-pip.py && pip install numpy pysam scipy && git clone --recursive https://github.com/hall-lab/speedseq && cd /speedseq && curl -OL https://root.cern.ch/download/root_v6.14.02.Linux-ubuntu16-x86_64-gcc5.4.tar.gz && tar -xzf root_v6.14.02.Linux-ubuntu16-x86_64-gcc5.4.tar.gz && rm root_v6.14.02.Linux-ubuntu16-x86_64-gcc5.4.tar.gz && rm -rf src/samtools-1.3.1 && curl -OL https://github.com/samtools/samtools/releases/download/1.8/samtools-1.8.tar.bz2 && tar -xjf samtools-1.8.tar.bz2 && rm samtools-1.8.tar.bz2 && mv samtools-1.8 src/ && cat Makefile | sed 's/1.3.1/1.8/' > temp && mv temp Makefile && cat src/CNVnator/Makefile | sed 's/MathCore/MathCore -lcrypto -llzma -lbz2 -lcurl/' > temp && mv temp src/CNVnator/Makefile" did not complete successfully: exit code: 1
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: docker/setup-buildx-action@v2, docker/build-push-action@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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