Monthly Docker Build Validation #20

Run time

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Job	Run time
Get Changed Dockerfiles Matrix	4s
Build BIC-seq2/0.7.2	50s
Build FusionAnnotator/0.1.1	1m 6s
Build FusionCatcher/latest	2m 3s
Build LOH/1.0.0	5m 52s
Build LOH/1.0.1	7m 38s
Build LinkedSV/latest	57s
Build PureCN	12m 37s
Build SVTyper/0.7.1	1m 42s
Build THetA2/0.7.0	1m 16s
Build THetA2/0.7.1	1m 25s
Build VEP/r93_v2	3m 27s
Build VEP/r93	3m 25s
Build VEP/r98	4m 30s
Build VEP/r93.7	3m 36s
Build VEP/r94	4m 35s
Build VarDictJava/1.5.8	1m 12s
Build VarDictJava/fp_filter	44s
Build VarDictJava/1.7.0	1m 10s
Build WGSA	3m 40s
Build add-strelka2-fields/1.0.0	2m 49s
Build annoFuse/0.91.0	10m 1s
Build annoFuse/0.92.0	11m 12s
Build annoFuse/0.90.0	39s
Build annotsv/3.1.1	2m 40s
Build annovar/latest	10s
Build arriba/2.2.1	1m 5s
Build arriba/latest	1m 20s
Build arriba/1.0.1	1m 0s
Build arriba/1.1.0	1m 19s
Build autopvs1/v2.0.0	2m 33s
Build autopvs1/v1.0.1	32s
Build bcbio/variation_recall-0.2.4	54s
Build bcftools/1.20	2m 20s
Build bed_tools/bedopsv2.4.36_plus_bedtools	22s
Build bvcftools	26s
Build bwa/0.7.17-r1188	29s
Build bwa/latest	23s
Build bwa/0.7.15-r1140	24s
Build bwa-bundle/0.1.17	57s
Build bwa-picard/broad	32s
Build bwa-picard/latest	31s
Build bwa-samtools	1m 18s
Build canvas/1.11.0	55s
Build cellranger/6.0	48s
Build cellranger/5.0	1m 39s
Build cellranger/6.1.2	15s
Build cellranger/3.1	2m 0s
Build cnvnator/v0.4.1	1m 54s
Build codex2/3.8	6m 54s
Build consensus-merge/1.0.0	7m 2s
Build consensus-merge/1.1.0	7m 11s
Build controlfreec/11.5	1m 58s
Build cutadapt/latest	53s
Build cutadapt/3.4	40s
Build cutesv/1.0.13	40s
Build cutesv/2.0.3	39s
Build echtvar/0.2.0	16s
Build echtvar/0.1.9	16s
Build echtvar/0.2.0-rc	11m 22s
Build fastqc/v0.11.9	46s
Build freebayes/v1.3.2	20s
Build freebayes/v1.3.1	21s
Build gatk/4.beta.1	31s
Build gatk/3.5-0-g36282e4	9s
Build gatk/4.beta.6-tabix	23s
Build gatk/4.0.1.2	24s
Build gatk/3.6-0-g89b7209	32s
Build gatk/4.0.1.0	41s
Build gatk/3.8	16s
Build gatk/latest	26s
Build gatk/4.2.0.0R	1m 45s
Build gatk/4.0.12.0	2m 56s
Build gatk/4.beta.1-3.5	50s
Build gatk/3.8_ubuntu	1m 18s
Build gatk/4.1.1.0	1m 2s
Build gatk/4.beta.5-tabix	25s
Build gatk/4.0.5.2	46s
Build gatk/4.1.7.0R	1m 35s
Build gatk/4.beta.5	21s
Build gatk/4.beta.6	22s
Build gatk-picard/4.0.1.2-2.8.3	23s
Build gatk-picard/4.beta.1-2.8.3	19s
Build gistic	3m 21s
Build hbc_scrna_qc/scrnaseq	17m 45s
Build hisat2/2.2.1	33s
Build hotspots/0.1.0	58s
Build intervar/v2.2.1	44s
Build isoseq/v4.0.0	14s
Build kf_vcf2maf/v1.0.0	21s
Build kf_vcf2maf/v1.0.3	2m 52s
Build kf_vcf2maf/v1.0.2	3m 0s
Build kf_vcf2maf/v1.0.1	3m 2s
Build lancet/1.0.7	1m 56s
Build lancet/1.1.x	2m 1s
Build lima/v2.9.0	22s
Build loompy/2.0.16	32s
Build lumpy-sv/0.2.13	42s
Build lumpy-sv/0.3.0	3m 34s
Build manta/1.6.0	30s
Build manta/1.4	32s
Build mend_qc	49s
Build minimap2/v2.28	25s
Build msisensor/1.1.a	1m 11s
Build nanocount/v1.1.0	3m 58s
Build ngscheckmate/1.3	1m 55s
Build octopus/0.6.3-beta	30m 0s
Build pbfusion/v0.4.1	22s
Build pbta-splicing/0.1	29m 46s
Build peddy/v0.4.7	1m 4s
Build peddy/v0.4.2	1m 23s
Build phlat/1.0.0	2m 34s
Build picard/2.18.9R	1m 16s
Build picard/2.14.0	15s
Build picard/latest	14s
Build picard/2.15.0	10s
Build picard/2.8.3	12s
Build picard/2.17.4	23s
Build picard/2.18.9	49s
Build picard-r/picard2.15.0-r.3.3.3	16s
Build picard-r/picard2.8.3-r3.3.3	12s
Build pigeon/v1.2.0	27s
Build pizzly/latest	1m 2s
Build plink/1.90b7.2	33s
Build pypy/3	5m 55s
Build pyspark/3.1.2	1m 21s
Build python/3.9-canine-util	1m 2s
Build python/2.7.13	8s
Build sambamba/0.6.3	27s
Build sambamba/0.7.1	18s
Build samtools/1.7-11-g041220d	1m 18s
Build samtools/1.3.1	46s
Build samtools/latest	52s
Build samtools/1.6	49s
Build samtools/1.15.1	2m 8s
Build samtools/1.9	1m 22s
Build samtools/1.20-parallel	20s
Build sanger/caveman-pindel/latest	4m 10s
Build scRNA_qc/v1.1.0	10m 40s
Build scRNA_qc/v1.0.0	18m 58s
Build scRNA_qc/v1.0.1	2m 56s
Build scdblfinder/1.8.0	5m 56s
Build scdblfinder/v1.12.0	10m 56s
Build scrublet/0.2.3	1m 20s
Build sentieon/202112.01_hifi	3m 20s
Build seqkit/2.3.1	16s
Build sequenza/3.0.0	28s
Build seurat/latest	39s
Build smoove/0.2.5	2m 8s
Build sniffles/2.0.7	33s
Build sniffles/2.0.3	35s
Build snpEff	44s
Build snpEff/4.3t	45s
Build soupx_R/1.6.2	11m 11s
Build soupx_R/4.1.0_SoupX	6h 0m 13s
Build speedseq/latest	39s
Build star/2.6.1d	17s
Build star/fusion-1.5.0	2m 44s
Build star/2.7.10a	29s
Build star/fusion-1.10.1	13m 21s
Build star/2.7.11a	17s
Build star/2.7.10b	16s
Build star/2.7.5a	24s
Build stranded/1.0.0	49s
Build stranded/1.1.0	56s
Build strelka/v2.9.10	32s
Build supremo/1.0.0	6m 31s
Build sv2/latest	32s
Build svaba/1.1.0	3m 0s
Build t1k/v1.0.5	2m 5s
Build t1k/v1.0.2	1m 4s
Build tidyverse/3.6.1-canine-util	26s
Build toolkit_immune_deconvolution/1.0.0	24m 36s
Build toolkit_subtyping/subtyping_v1.0	4h 38m 49s
Build toolkit_subtyping/subtyping_v1.1	4h 37m 8s
Build toolkit_subtyping/subtyping_v2.0	3h 42m 4s
Build toolkit_subtyping/4.1.0R	6h 0m 12s
Build toolkit_subtyping/pyreader0.4.4	6h 0m 10s
Build toolkit_tmb/1.0.0	6m 10s
Build tumor-only-benchmarking/1.0.0	4m 12s
Build vcf_utils	33s
Build velocyto/0.17.17	4m 52s
Build verifybamid/latest	2m 39s
Build verifybamid/1.0.2	2m 49s
Build verifybamid/1.0.1	2m 41s
Build zumis/2.9.4	2m 30s
	1d 14h 46m 34s

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Monthly Docker Build Validation #20

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Monthly Docker Build Validation #20

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