v2.1.0

Release Notes

CHANGES

• [REL] v2.1.0 (#728) @Remi-Gau
• [FIX] fix lesion segmentation output (and refactor) (#727) @Remi-Gau
• [FIX] add more explicit error message for input parsing of getData (#726) @Remi-Gau
• [FIX] support globbing patterns to specify conditions in design matrix (#716) @Remi-Gau
• [FIX] fix ALI toolbox issues (#723) @Remi-Gau
• [MNT] update citation file (#721) @Remi-Gau
• [ENH] add possibility to use AAL for labelling of activations (#717) @Remi-Gau
• docs: add christine0903 as a contributor for ideas (#720) @allcontributors
• [pre-commit.ci] pre-commit autoupdate (#718) @pre-commit-ci
• [FIX] improve warning selecting too many masks (#715) @Remi-Gau
• [FIX] fix and refactor demos, and update help sections (#701) @Remi-Gau
• [pre-commit.ci] pre-commit autoupdate (#714) @pre-commit-ci
• [FIX] add guard clauses to run ROI based analysis only when requested (#708) @Remi-Gau
• [FIX] convert nan to zeros in confounds (#700) @Remi-Gau
• [FIX] change default space value in cpp_spm (#699) @Remi-Gau
• docs: add JeanneCaronGuyon as a contributor for bug (#697) @allcontributors
• [FIX] various bug fixes (#694) @Remi-Gau
• [FIX] add some warnings to handle several bugs with empty ROIs (#693) @Remi-Gau
• [INFRA] fix octave tests (#692) @Remi-Gau
• [FIX] re enable octave tests CI (#686) @Remi-Gau
• [FIX] patches for #682 and #683 (#687) @mwmaclean
• docs: add mwmaclean as a contributor for bug (#688) @allcontributors
• [DOC] update FAQ to help structure data to run stats on fmriprep (#685) @Remi-Gau
• [DEP] update bids matlab (#680) @Remi-Gau
• [FIX] ensure that bidsResults does not run if we don't have the proper options (#679) @Remi-Gau
• [DOC] add demo for ds002799 (#678) @Remi-Gau
• [DOC] add DIY section to documtation (#677) @Remi-Gau
• [FIX] returnRootDir only relies on fullpaths (#676) @Remi-Gau
• [FIX] set minimum compatible fmriprep version (#675) @Remi-Gau
• [DOC] improve description of stats output and of bids stats model (#670) @Remi-Gau
• [FIX] renaming of design matrix images at group level (#668) @Remi-Gau
• [FIX] make sure 2 sample ttest can run more than one contrasts (#665) @Remi-Gau
• [FIX] label actiation: csv results file witrh no significant voxels are ignored with a warning (#663) @Remi-Gau
• [INFRA] improve issue template (#661) @Remi-Gau
• [FIX] onsets and confounds are saved in the proper dir when there are several tasks (#659) @Remi-Gau
• [FIX] fix silent dry run override (#657) @Remi-Gau
• [FIX] use proper subject background for montage (#656) @Remi-Gau
• [FIX] allow extra BIDS entities to be integrated in glm dir name (#654) @Remi-Gau
• [FIX] make GLM path more consistent (#652) @Remi-Gau
• [FIX] prevent some crashes if Model.Input are not passed as arrays (#650) @Remi-Gau
• [FIX] fix printing of of path (#649) @Remi-Gau
• [pre-commit.ci] pre-commit autoupdate (#641) @pre-commit-ci
• [FIX] properly skip segment and sullstrip (#638) @Remi-Gau
• [FIX] use unix format when priting path to screen (#634) @Remi-Gau
• [FIX] getEnvInfo for windows (#631) @Remi-Gau