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Sm dev #62

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Sm dev #62

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Commits on Oct 23, 2024

  1. AZ segmentation

    @SarahMuth
    SarahMuth committed Oct 23, 2024
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Commits on Oct 28, 2024

  1. updates

    @SarahMuth
    SarahMuth committed Oct 28, 2024
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  2. Merge branch 'main' of https://github.com/computational-cell-analytic… 

    …s/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Oct 28, 2024
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  3. update 2D DA

    @SarahMuth
    SarahMuth committed Oct 28, 2024
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Commits on Oct 29, 2024

  1. Merge branch 'main' of https://github.com/computational-cell-analytic… 

    …s/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Oct 29, 2024
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Commits on Nov 7, 2024

  1. small updates, compartment segmentation

    @SarahMuth
    SarahMuth committed Nov 7, 2024
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  2. Implement code for first analysis

    @constantinpape
    constantinpape committed Nov 7, 2024
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Commits on Nov 11, 2024

  1. 2D seg with mask

    @SarahMuth
    SarahMuth committed Nov 11, 2024
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  2. Merge branch 'analysis' of https://github.com/computational-cell-anal… 

    …ytics/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Nov 11, 2024
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  3. spatial distribution analysis

    @SarahMuth
    SarahMuth committed Nov 11, 2024
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Commits on Nov 12, 2024

  1. intersection between compartment boundary and AZ segmentaiton

    @SarahMuth
    SarahMuth committed Nov 12, 2024
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  2. Merge branch 'main' of https://github.com/computational-cell-analytic… 

    …s/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Nov 12, 2024
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  3. Update compartment postprocessing

    @constantinpape
    constantinpape committed Nov 12, 2024
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  4. Merge branch 'more-comp-seg-updates' of https://github.com/computatio… 

    …nal-cell-analytics/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Nov 12, 2024
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Commits on Nov 13, 2024

  1. updating data analysis on smaller details

    @SarahMuth
    SarahMuth committed Nov 13, 2024
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  2. minor updates data analysis

    @SarahMuth
    SarahMuth committed Nov 13, 2024
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Commits on Nov 14, 2024

  1. Implement inner ear analysis WIP

    @constantinpape
    constantinpape committed Nov 14, 2024
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  2. calculation of AZ area

    @SarahMuth
    SarahMuth committed Nov 14, 2024
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  3. corrected radius factor

    @SarahMuth
    SarahMuth committed Nov 14, 2024
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Commits on Nov 15, 2024

  1. Update inner ear analysis

    @constantinpape
    constantinpape committed Nov 15, 2024
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Commits on Nov 17, 2024

  1. Update inner ear analysis

    @constantinpape
    constantinpape committed Nov 17, 2024
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  2. Updates to inner ear training and eval

    @constantinpape
    constantinpape committed Nov 17, 2024
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Commits on Nov 18, 2024

  1. Update inner ear analysis

    @constantinpape
    constantinpape committed Nov 18, 2024
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Commits on Nov 19, 2024

  1. minor changes

    @SarahMuth
    SarahMuth committed Nov 19, 2024
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  2. Merge branch 'main' of https://github.com/computational-cell-analytic… 

    …s/synaptic-reconstruction into more-inner-ear-analysis
    @constantinpape
    constantinpape committed Nov 19, 2024
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Commits on Nov 20, 2024

  1. Update inner ear analysis scripts

    @constantinpape
    constantinpape committed Nov 20, 2024
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  2. Merge branch 'more-inner-ear-analysis' of https://github.com/computat… 

    …ional-cell-analytics/synaptic-reconstruction into more-inner-ear-analysis
    @constantinpape
    constantinpape committed Nov 20, 2024
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  3. Add script to extract vesicle diameters for inner ear data

    @constantinpape
    constantinpape committed Nov 20, 2024
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Commits on Nov 21, 2024

  1. Update active zone analysis for SNAP/MUNC data

    @constantinpape
    constantinpape committed Nov 21, 2024
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  2. Add more inner ear analysis code

    @constantinpape
    constantinpape committed Nov 21, 2024
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Commits on Nov 23, 2024

  1. evaluation of AZ seg

    @SarahMuth
    SarahMuth committed Nov 23, 2024
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  2. Fix issues with the segmentation export to IMOD

    @constantinpape
    constantinpape committed Nov 23, 2024
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  3. clean up

    @SarahMuth
    SarahMuth committed Nov 23, 2024
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  4. clean up

    @SarahMuth
    SarahMuth committed Nov 23, 2024
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  5. clean up

    @SarahMuth
    SarahMuth committed Nov 23, 2024
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Commits on Nov 24, 2024

  1. Update data summaries

    @constantinpape
    constantinpape committed Nov 24, 2024
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  2. Fix issue in data aggregation

    @constantinpape
    constantinpape committed Nov 24, 2024
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  3. Update data summary

    @constantinpape
    constantinpape committed Nov 24, 2024
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  4. Merge branch 'main' into more-inner-ear-analysis

    @constantinpape
    constantinpape committed Nov 24, 2024
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  5. Update all measurements for the inner ear analysis

    @constantinpape
    constantinpape committed Nov 24, 2024
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  6. Update vesicle diameter analysis

    @constantinpape
    constantinpape committed Nov 24, 2024
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Commits on Nov 25, 2024

  1. Merge branch 'more-inner-ear-analysis' of https://github.com/computat… 

    …ional-cell-analytics/synaptic-reconstruction into sm-dev
    @SarahMuth
    SarahMuth committed Nov 25, 2024
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Commits on Nov 27, 2024

  1. update AZ evaluation

    @SarahMuth
    SarahMuth committed Nov 27, 2024
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Commits on Nov 28, 2024

  1. erosion dilation filtering of AZ

    @SarahMuth
    SarahMuth committed Nov 28, 2024
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