test job creation with file input #13985
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| name: CI | |
| on: [push, pull_request] | |
| env: | |
| PYTHON_VERSION: "3.11" | |
| concurrency: | |
| group: ${{ github.head_ref || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| precommit: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install Python ${{ env.PYTHON_VERSION }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON_VERSION }} | |
| - uses: actions/checkout@v4 | |
| - name: Install pre-commit | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pre-commit virtualenv!=20.0.6 | |
| pre-commit install | |
| - name: Run static code inspections | |
| run: pre-commit run --all-files | |
| django-tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up Python ${{ env.PYTHON_VERSION }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON_VERSION }} | |
| - uses: actions/checkout@v4 | |
| - name: Build the test container | |
| run: | | |
| make build_web_test | |
| - name: Set DOCKER_GID | |
| run: | | |
| echo DOCKER_GID=`getent group docker | cut -d: -f3` > .env | |
| - name: Check migrations have been made | |
| run: make check_migrations | |
| - name: Run the django tests | |
| run: | | |
| make minio | |
| docker compose run --rm celery_worker pytest --durations 10 | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build the test container | |
| run: | | |
| make build_web_test | |
| - name: Set DOCKER_GID | |
| run: | | |
| echo DOCKER_GID=`getent group docker | cut -d: -f3` > .env | |
| - name: Build the docs | |
| run: | | |
| make docs | |
| - name: Deploy the documentation on main | |
| if: github.ref == 'refs/heads/main' | |
| uses: peaceiris/actions-gh-pages@v4 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: ./app/docs/_build/html | |
| deploy: | |
| needs: [django-tests] | |
| runs-on: ubuntu-latest | |
| permissions: | |
| # These permissions are needed to interact with GitHub's OIDC Token endpoint. | |
| id-token: write | |
| contents: read | |
| if: github.ref == 'refs/heads/main' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build the distributable containers | |
| # The cache is required for compressing the files | |
| run: | | |
| echo DOCKER_GID=`getent group docker | cut -d: -f3` > .env | |
| docker compose up -d redis | |
| make build | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| role-to-assume: ${{ secrets.AWS_ROLE_ARN }} | |
| aws-region: us-east-1 | |
| - name: Push to ECR | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y retry | |
| retry -t 5 -- /bin/bash -c 'aws ecr-public get-login-password --region us-east-1 | docker login --username AWS --password-stdin public.ecr.aws/diag-nijmegen/grand-challenge/web-base' | |
| retry -t 5 -- make push_web_base | |
| retry -t 5 -- /bin/bash -c 'aws ecr-public get-login-password --region us-east-1 | docker login --username AWS --password-stdin public.ecr.aws/diag-nijmegen/grand-challenge/web' | |
| retry -t 5 -- make push_web | |
| retry -t 5 -- /bin/bash -c 'aws ecr-public get-login-password --region us-east-1 | docker login --username AWS --password-stdin public.ecr.aws/diag-nijmegen/grand-challenge/http' | |
| retry -t 5 -- make push_http | |
| retry -t 5 -- /bin/bash -c 'aws ecr-public get-login-password --region us-east-1 | docker login --username AWS --password-stdin public.ecr.aws/diag-nijmegen/grand-challenge/web-test-base' | |
| retry -t 5 -- make push_web_test_base |