--

SummCreate.py

@@ -5,6 +5,13 @@
 import re
 import DQXEncoder
 import random
+import simplejson
+import math
+import DQXMathUtils
+import os
+import re
+import DQXEncoder
+import random
 
 
 #############################################################################################
@@ -233,7 +240,9 @@ def __init__(self,ibasedir,ifolder,iconfig):
         self.config=iconfig
         self.datadir=self.basedir+'/'+self.folder
         print('Initialising Creator, directory="{0}", config="{1}"'.format(self.datadir,self.config))
-        configdata=ReadJsonFile(self.datadir+'/'+self.config+".cnf")
+        configfilename = self.datadir+'/'+self.config+".cnf"
+        print('config filename= ' + configfilename)
+        configdata=ReadJsonFile(configfilename)
         if configdata is None:
             self.present = False
             return

_CreateFilterBankData.py

@@ -7,7 +7,7 @@
 
 #============= FAKE STUFF FOR DEBUGGING; REMOVE FOR PRODUCTION ==============
 #basedir='C:\Data\Test\Genome'
-#sys.argv=['','Test','Summ01']
+#sys.argv=['','/home/pvaut/Documents/Genome/Tracks-PfPopGen3.1/Coverage2','Summ01']
 #============= END OF FAKE STUFF ============================================