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Rdm skill earmgr
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MarkUoLeeds authored Feb 28, 2024
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12 changes: 6 additions & 6 deletions content/da-07-dois.md
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Check your journal's manuscript submission guidelines for a recommended format
</li>
<li class="fragment fade-in">
A typical data citation format:<br/>
<strong class="fragment fade-in" style="font-size:large">creators: title, publisher/repository, identifier, publication year.</strong>
<div class="fragment fade-in" style="font-size: large">
A typical data citation format:

creators: title, publisher/repository, identifier, publication year.

Loew, A., Bennartz, R., Fell, F., Lattanzio, A., Doutriaux-Boucher, M., and Schulz, J.: Surface Albedo Validation Sites, EUMETSAT, http://dx.doi.org/10.15770/EUM_SEC_CLM_1001, 2015.
</div>
</li>
</ul>

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<ul>
<li class="fragment fade-in">
Be specific: refer to the sections of your manuscript that rely on the data you are citing
<p style="font-size:large">"The image data supporting Fig. 2 and Fig. 4 are publicly available in the figshare repository as part of the following record: doi:10.1234/xyz [18]."</p>
<p>"The image data supporting Fig. 2 and Fig. 4 are publicly available in the figshare repository as part of the following record: doi:10.1234/xyz [18]."</p>
</li>
<li class="fragment fade-in">
Cite your dataset as an individual contribution
<p style="font-size:large">"The data associated with this paper (microscopy images, geometrical dimensions, model input files and results) are openly available from the University of Leeds Data Repository (Mengoni and Wilcox, 2015)."</p>
<p>"The data associated with this paper (microscopy images, geometrical dimensions, model input files and results) are openly available from the University of Leeds Data Repository (Mengoni and Wilcox, 2015)."</p>
</li>
</ul>

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24 changes: 16 additions & 8 deletions content/rdm-01-data-structure.md
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.
```

<span class="footnote"> &copy; Crown 2021 copyright Defra via [uk-air.defra.gov.uk](https://uk-air.defra.gov.uk), licenced under the [Open Government Licence](http://www.nationalarchives.gov.uk/doc/open-government-licence/version/2/) (OGL) </span>
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- &copy; Crown 2021 copyright Defra via [uk-air.defra.gov.uk](https://uk-air.defra.gov.uk), licenced under the [Open Government Licence](http://www.nationalarchives.gov.uk/doc/open-government-licence/version/2/) (OGL)


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|... |... |... |
```

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&copy; Crown 2021 copyright Defra via [uk-air.defra.gov.uk](https://uk-air.defra.gov.uk), licenced under the [Open Government Licence](http://www.nationalarchives.gov.uk/doc/open-government-licence/version/2/) (OGL) </span>

<span class="footnote"> &copy; Crown 2021 copyright Defra via [uk-air.defra.gov.uk](https://uk-air.defra.gov.uk), licenced under the [Open Government Licence](http://www.nationalarchives.gov.uk/doc/open-government-licence/version/2/) (OGL) </span>


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<li>
What is the interface for accessing data?
<ul>
<li><a href="https://www.ncei.noaa.gov/data/global-forecast-system/access/grid-004-0.5-degree/forecast/202210/20221031/">Remote access</a> e.g. FTP or HTTP <!-- Example NOAA recent data -->
<li><a href="https://www.ncei.noaa.gov/data/global-forecast-system/access/grid-004-0.5-degree/forecast/">Remote access</a> e.g. FTP or HTTP <!-- Example NOAA recent data -->
<ul>
<li>Access via FTP client or web browser</li>
<li>Automate using command line scripting</li>
<li>Access via FTP client or web browser</li> <!-- .element class="smaller" -->
<li>Automate using command line scripting</li> <!-- .element class="smaller" -->
</ul>
</li>
<li><a href="https://www.ncei.noaa.gov/has/HAS.FileAppRouter?datasetname=GFSGRB24&subqueryby=STATION&applname=&outdest=FILE">Order form on website</a></li>
<li><a href="https://www.metoffice.gov.uk/services/data/datapoint/about">Web API based access</a> <!-- Example: Met Office DataPoint -->
<ul>
<li>Register for API key</li>
<li>Submit URL based query to access data</li>
<li>Data served in XML/JSON format</li>
<li>Fair use policy</li>
<li>Register for API key</li> <!-- .element class="smaller" -->
<li>Read the docs <a href="https://www.metoffice.gov.uk/services/data/datapoint/getting-started">www.metoffice.go.uk/services/data/datapoint/getting-started</a> </li>
<li>Submit URL based query to access data</li> <!-- .element class="smaller" -->
<li>Data served in XML/JSON format</li> <!-- .element class="smaller" -->
<li>Fair use policy</li> <!-- .element class="smaller" -->
</ul>
</li>
</ul>
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- Frequency of backup
- Ensuring sufficient capacity
- Transfer speed

#--
### PAUSE here
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</div>

#--

* These courses usually delivered in November/December
* <span>**Introduction to the UNIX Shell**<br/>
Wednesday 7th December, 09:00&ndash;13:00<br/>
_An introduction to using the bash shell for those who are new to working with UNIX / Linux systems from the command line._</span> <!-- .element class="smaller" -->
* <span>**Version control with Git**<br/>
Thursday 8th December, 09:00&ndash;13:00<br/>
_Getting started with using Git (and GitHub) for version control._</span> <!-- .element class="smaller" -->
* <span>**Programming in Python**<br/>
Tuesday 13th December, 09:00&ndash;17:00</br>
_An introduction to programming and plotting data with Python._</span> <!-- .element class="smaller" -->

<span style="font-size:70%">Email <a href="mailto:[email protected]?subject=CEMAC%20Training">[email protected]</a> with subject &ldquo;CEMAC Training&rdquo; to sign up</span>
4 changes: 2 additions & 2 deletions content/rdm-landing.md
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[cemac.github.io/rdm-skills](https://cemac.github.io/rdm-skills/)

<img src="img/all_logos-2-scaled.png" />
Adapted by Mark RIchardson, <[email protected]> based on original work by
Tamora James, while she was working for the Centre for Environmental Modelling and Computation (CEMAC), University of Leeds

Tamora James, Centre for Environmental Modelling and Computation (CEMAC), University of Leeds
<[email protected]>
</div>


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10 changes: 7 additions & 3 deletions content/version-control.md
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#--
#### More about version control

- Often delivered in December

- <em>Version control with Git</em>, CEMAC training session<br/>
Thursday 8th December, 09:00&ndash;13:00<br/>
<span style="font-size:70%">Email <a href="mailto:[email protected]?subject=CEMAC%20Training">[email protected]</a> with subject &ldquo;CEMAC Training&rdquo; to sign up</span>

- <em>Introduction to version control for research</em><br/>
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#--
### Resources
#### Cheatsheets and tutorials
#### Summary Guides and Tutorials

<div class="smaller">

- git - the simple guide [rogerdudler.github.io/git-guide](http://rogerdudler.github.io/git-guide/)
- Happy Git and GitHub for the useR [happygitwithr.com](https://happygitwithr.com/)
- Using Version Control with RStudio [support.rstudio.com](https://support.rstudio.com/hc/en-us/articles/200532077-Version-Control-with-Git-and-SVN)
- oh shit, git! [ohshitgit.com](https://ohshitgit.com/)
- oh dangit, git! [dangitgit.com](https://dangitgit.com/)

</div>

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</div>

### PAUSE here


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