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v0.1.0

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@rm1113 rm1113 released this 19 Sep 10:05
· 36 commits to main since this release

Added

  • Initial release of CAP-AnnData.
  • Introduced the CapAnnData class for managing AnnData files, with functionalities to:
    • Read and write specific columns of obs and var.
    • Handle the X and raw.X matrices efficiently.
    • Link and manage obsm and uns sections lazily, loading them only when accessed.
  • Included the CapAnnDataDF class to extend pandas.DataFrame for handling partial reads and writes, with additional methods for renaming and removing columns.
  • Provided the CapAnnDataDict class to manage the uns section of AnnData files, tracking keys to remove upon overwrite.
  • Implemented methods to facilitate in-memory modifications and saving changes back to the file, including the overwrite method to selectively update sections of the AnnData file.

Full Changelog: https://github.com/cellannotation/cap-anndata/commits/v0.1.0