prepare v0.7.0 #6
Workflow file for this run
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| # The starting point of this script are the links provided on the maturing doc: | |
| # * https://github.com/nanoporetech/fast-ctc-decode/blob/b226ea0f2b2f4f474eff47349703d57d2ea4801b/.github/workflows/publish.yml | |
| # * https://github.com/konstin/complex-manylinux-maturin-docker/blob/main/.github/workflows/build.yml | |
| name: publish-cdshealpix-wheels | |
| # Exec only if a tag starting by 'v' is pushed | |
| # see: https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions | |
| on: | |
| push: | |
| tags: | |
| - v* | |
| # Allows to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # Jobs run in parallel, see https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#jobs | |
| # Github hosted runner are: see https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners | |
| jobs: | |
| # Comming in large parts from @odidev in MOCPy pull request | |
| build-linux32-wheels: | |
| runs-on: ubuntu-latest | |
| env: | |
| MATURIN_USERNAME: ${{ secrets.PYPI_USERNAME_FXP }} | |
| MATURIN_PASSWORD: ${{ secrets.PYPI_PASSWORD_FXP }} | |
| img: quay.io/pypa/manylinux2014_i686 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: "Set up QEMU" | |
| id: qemu | |
| uses: docker/setup-qemu-action@v1 | |
| - name: Install dependencies | |
| run: | | |
| docker run --rm -v ${{ github.workspace }}:/ws:rw --workdir=/ws \ | |
| -e MATURIN_USERNAME=${{ env.MATURIN_USERNAME }} \ | |
| -e MATURIN_PASSWORD=${{ env.MATURIN_PASSWORD}} \ | |
| ${{ env.img }} \ | |
| bash -exc 'curl --proto "=https" --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y && \ | |
| source $HOME/.cargo/env && \ | |
| for PYBIN in /opt/python/cp3{8,9,10,11,12}-*/bin; do | |
| echo "Loop on PYBIN: $PYBIN" | |
| "${PYBIN}/pip" install --upgrade pip | |
| "${PYBIN}/pip" install maturin | |
| "${PYBIN}/maturin" -V | |
| rustc -vV | |
| echo "${PYBIN}/python" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --no-sdist --skip-existing --compatibility manylinux2014 --username "$MATURIN_USERNAME" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --no-sdist --skip-existing --compatibility musllinux_1_2 --username "$MATURIN_USERNAME" | |
| done' | |
| build-aarch64-wheels: | |
| runs-on: ubuntu-latest | |
| env: | |
| MATURIN_USERNAME: ${{ secrets.PYPI_USERNAME_FXP }} | |
| MATURIN_PASSWORD: ${{ secrets.PYPI_PASSWORD_FXP }} | |
| img: quay.io/pypa/manylinux2014_aarch64 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: "Set up QEMU" | |
| id: qemu | |
| uses: docker/setup-qemu-action@v1 | |
| - name: Install dependencies | |
| run: | | |
| docker run --rm -v ${{ github.workspace }}:/ws:rw --workdir=/ws \ | |
| -e MATURIN_USERNAME=${{ env.MATURIN_USERNAME }} \ | |
| -e MATURIN_PASSWORD=${{ env.MATURIN_PASSWORD}} \ | |
| ${{ env.img }} \ | |
| bash -exc 'curl --proto "=https" --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- --default-host aarch64-unknown-linux-gnu -y && \ | |
| source $HOME/.cargo/env && \ | |
| for PYBIN in /opt/python/cp3{8,9,10,11,12}-*/bin; do | |
| echo "Loop on PYBIN: $PYBIN" | |
| "${PYBIN}/pip" install --upgrade pip | |
| "${PYBIN}/pip" install maturin | |
| "${PYBIN}/maturin" -V | |
| rustc -vV | |
| echo "${PYBIN}/python" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --skip-existing --compatibility manylinux2014 --username "$MATURIN_USERNAME" --target aarch64-unknown-linux-gnu --config "net.git-fetch-with-cli = true" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --skip-existing --compatibility musllinux_1_2 --username "$MATURIN_USERNAME" --target aarch64-unknown-linux-gnu --config "net.git-fetch-with-cli = true" | |
| done' | |
| # Comming in large parts from @odidev in MOCPy pull request | |
| build-linux_x86_64-wheels: | |
| runs-on: ubuntu-latest | |
| env: | |
| MATURIN_USERNAME: ${{ secrets.PYPI_USERNAME_FXP }} | |
| MATURIN_PASSWORD: ${{ secrets.PYPI_PASSWORD_FXP }} | |
| img: quay.io/pypa/manylinux2014_x86_64 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: "Set up QEMU" | |
| id: qemu | |
| uses: docker/setup-qemu-action@v1 | |
| - name: Install dependencies | |
| run: | | |
| docker run --rm -v ${{ github.workspace }}:/ws:rw --workdir=/ws \ | |
| -e MATURIN_USERNAME=${{ env.MATURIN_USERNAME }} \ | |
| -e MATURIN_PASSWORD=${{ env.MATURIN_PASSWORD}} \ | |
| ${{ env.img }} \ | |
| bash -exc 'curl --proto "=https" --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y && \ | |
| source $HOME/.cargo/env && \ | |
| for PYBIN in /opt/python/cp3{8,9,10,11,12}-*/bin; do | |
| echo "Loop on PYBIN: $PYBIN" | |
| "${PYBIN}/pip" install --upgrade pip | |
| "${PYBIN}/pip" install maturin | |
| "${PYBIN}/maturin" -V | |
| rustc -vV | |
| echo "${PYBIN}/python" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --skip-existing --compatibility manylinux2014 --username "$MATURIN_USERNAME" | |
| "${PYBIN}/maturin" publish -i "${PYBIN}/python" -v --skip-existing --compatibility musllinux_1_2 --username "$MATURIN_USERNAME" | |
| done' | |
| build-windows-wheels: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # See https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#jobsjob_idstrategyfail-fast | |
| # run all matrix jobs even if on is failling (default behaviour is to stop all jobs) | |
| fail-fast: false | |
| matrix: | |
| os: [windows-latest] | |
| python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
| steps: | |
| # Checkout the project | |
| - uses: actions/checkout@v4 | |
| # Set up python, see https://docs.github.com/en/actions/guides/building-and-testing-python | |
| - name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # For secrets, see https://docs.github.com/en/actions/reference/encrypted-secrets | |
| - name: Build and publish wheel for Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| # We do not use environement variable for user, because it seems that the way of providing it in the command | |
| # line is not the same for macos and for windows. We should create 2 different actions (see | |
| # https://docs.github.com/en/actions/reference/encrypted-secrets ) | |
| env: | |
| MATURIN_USERNAME: ${{ secrets.PYPI_USERNAME_FXP }} | |
| MATURIN_PASSWORD: ${{ secrets.PYPI_PASSWORD_FXP }} | |
| run: | | |
| #python3 -m pip install maturin | |
| pip install --upgrade pip | |
| pip install maturin | |
| #maturin build --release --no-sdist | |
| #maturin publish --no-sdist --skip-existing --username fxpineau | |
| maturin -V | |
| rustc -vV | |
| maturin publish --interpreter python${{matrix.python_version}} --no-sdist --skip-existing --username fxpineau | |
| build-macos-wheels: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # See https://docs.github.com/en/actions/reference/workflow-syntax-for-github-actions#jobsjob_idstrategyfail-fast | |
| # run all matrix jobs even if on is failling (default behaviour is to stop all jobs) | |
| fail-fast: false | |
| matrix: | |
| os: [macOS-latest] | |
| python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
| steps: | |
| # Checkout the project | |
| - uses: actions/checkout@v4 | |
| # Set up python, see https://docs.github.com/en/actions/guides/building-and-testing-python | |
| - name: Set up Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # For secrets, see https://docs.github.com/en/actions/reference/encrypted-secrets | |
| - name: Build and publish wheel for Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| # We do not use environement variable for user, because it seems that the way of providing it in the command | |
| # line is not the same for macos and for windows. We should create 2 different actions (see | |
| # https://docs.github.com/en/actions/reference/encrypted-secrets ) | |
| env: | |
| MATURIN_USERNAME: ${{ secrets.PYPI_USERNAME_FXP }} | |
| MATURIN_PASSWORD: ${{ secrets.PYPI_PASSWORD_FXP }} | |
| run: | | |
| #python3 -m pip install maturin | |
| rustup target add aarch64-apple-darwin | |
| rustup target add x86_64-apple-darwin | |
| pip install --upgrade pip | |
| pip install maturin | |
| maturin -V | |
| rustc -vV | |
| echo "${PYBIN}/python" | |
| maturin publish --interpreter python${{matrix.python_version}} --no-sdist --target universal2-apple-darwin --skip-existing --username "$MATURIN_USERNAME" | |
| maturin publish --interpreter python${{matrix.python_version}} --no-sdist --skip-existing --username "$MATURIN_USERNAME" |