-
Notifications
You must be signed in to change notification settings - Fork 46
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
1 parent
3eb06bb
commit 449fb91
Showing
4 changed files
with
402 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,27 @@ | ||
| # config file for Human respiratory syncytial virus B | ||
| # config file is used to process Illumina RSV samples | ||
|
|
||
| general: | ||
| virus_base_config: "" | ||
| preprocessor: "prinseq" | ||
| aligner: "bwa" | ||
| primers_trimmer: "samtools" | ||
|
|
||
| input: | ||
| datadir: "samples/" | ||
| samples_file: "samples.tsv" | ||
| read_length: 251 | ||
| primers_bedfile: "{VPIPE_BASEDIR}/../resources/rsvb/RSVB_primers_400_V2.1.bed" | ||
| inserts_bedfile: "{VPIPE_BASEDIR}/../resources/rsvb/RSVB_inserts_400_V2.1.bed" | ||
| reference: "{VPIPE_BASEDIR}/../resources/rsvb/MT107528.1.fasta" | ||
|
|
||
| output: | ||
| datadir: "results" | ||
| trim_primers: true | ||
| snv: false | ||
| local: false | ||
| global: false | ||
| snv: | ||
| consensus: false | ||
| lofreq: | ||
| consensus: false |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,221 @@ | ||
| >MT107528.1 Human respiratory syncytial virus B isolate HRSV/B/Bern/2019, complete genome | ||
| TGACGAAACGGAGTCTAGACTCCGTCACGCGAAAAAATGCGTACTACAAACTTGCACACTCGAAAAAAAT | ||
| GGGGCAAATAAGAATTTGATAAGTGCTATTTAAGTCTAACCTTTTTAATCAGAAATGGGGTGCAATTCAC | ||
| TGAGCATGATAAAGGTTAGATTACAAAATTTGTTTGATAATGACGAAGTAGCATTGTTAAAAATAACATG | ||
| TTATACTGACAAATTAATTCTTCTGACTAATGCATTAGCCAAAGCAACAATACATACAATTAAATTAAAC | ||
| GGCATAGTTTTTATACATGTTATAACAAGCAGTGAAGTGTGCCCTGATAACAATATTGTAGTGAAATCTA | ||
| ACTTTACAACAATGCCAATATTACAAAATGGAGGATACATATGGGAATTGATTGAATTGACACACTGCTC | ||
| TCAATTAAATGGTCTAATAGATGATAATTGTGAAATCAAATTTTCTAAAAGACTAAGTGACTCAGTAATG | ||
| ACTGATTATATGAATCAAATATCTGATTTACTTGGGCTTGATCTCCATTCATGAATTATGTTTAGTCTAA | ||
| TTCAATAGACATGTGTTTATTACCATTTTAGTTAATATAAAACCTCATCAAAGGGAGATGGGGCAAATAA | ||
| ACTCACCCAATCAATCAAACCATGAGCACTACAAACGACAACACCACCATGCAAAGATTGATGATCACAG | ||
| ACATGAGACCCCTGTCGATGGATTCAATAATAACATCTCTCACCAAAGAAATCATCACACACAAATTCAT | ||
| ATACTTGATAAACAATGAATGTATTGTAAGAAAACTCGATGAAAGACAAGCTACATTTACATTCCTAGTC | ||
| AATTATGAGATGAAGCTATTGCACAAAGTAGGGAGTACCAAATACAAGAAATACACCGAATATAATACAA | ||
| AATATGGCACATTCCCTATGCCTATATTTATCAATCATGGCGGGTTTCTAGAATGTATTGGCATTAAGCC | ||
| TACAAAACATACTCCTATAATATACAAATATGACCTCAACCCGTAACTTCCAACAAAAAAACCAACTCAT | ||
| CCAAACCAAGCCATTCTCCAAACAACAATGCTCAACAGTTAAGAAGGAGCTAATCCATTTTAGTAATTAA | ||
| AAATAAGGGTGAAACCAGTAACATAAATTGGGGCAAATACAAAGATGGCTCTTAGCAAAGTCAAGTTGAA | ||
| TGATACATTAAATAAGGATCAGCTGCTGTCATCCAGCAAATACACTATTCAACGTAGTACAGGAGATAAT | ||
| ATTGACACTCCCAATTATGATGTGCAAAAACACCTAAACAAACTATGTGGTATGCTATTAATCACTGAAG | ||
| ATGCAAATCATAAATTCACAGGATTAATAGGTATGCTATATGCTATGTCCAGATTAGGAAGGGAAGACAC | ||
| TATAAAGATACTTAAAGATGCTGGATATCATGTTAAAGCTAATGGAGTAGATATAACAACATATCGTCAA | ||
| GATATAAATGGAAAGGAAATGAAATTCGAAGTATTAACATTATCAAGCTTGACATCAGAAATACAAGTCA | ||
| ATATTGAGATAGAATCTAGAAAGTCCTACAAAAAAATGCTAAAAGAGATGGGAGAAGTGGCTCCAGAATA | ||
| TAGGCATGATTCTCCAGACTGTGGGATGATAATACTGTGTATAGCTGCCCTTGTAATAACCAAATTAGCA | ||
| GCAGGAGATAGATCAGGTCTTACAGCAGTAATTAGGAGGGCAAACAATGTCTTAAAAAACGAAATAAAAC | ||
| GCTACAAGGGCCTAATACCAAAAGACATAGCCAACAGTTTTTATGAAGTGTTTGAAAAATACCCTCATCT | ||
| TATAGATGTTTTTGTGCACTTTGGCATAGCACAATCATCCACAAGAGGGGGCAGTAGAGTTGAAGGAATC | ||
| TTTGCAGGATTGTTTATGAATGCCTATGGTTCAGGACAAGTAATGCTAAGATGGGGAGTTTTAGCCAAAT | ||
| CTGTAAAAAATATCATGCTAGGACATGCTAGTGTCCAAGCAGAAATGGAGCAAGTTGTGGAAGTCTATGA | ||
| GTATGCACAGAAGTTGGGAGGAGAAGCTGGTTTCTACCATATATTGAACAATCCAAAAGCATCATTGCTG | ||
| TCATTAACTCAATTTCCTAACTTCTCAAGTGTGGTCCTAGGCAATGCAGCAGGTCTAGGCATAATGGGAG | ||
| AGTATAGAGGTACACCAAGAAACCAAGATCTCTATGATGCAGCCAAAGCATATGCAGAGCAACTCAAAGA | ||
| AAATGGAGTAATAAACTACAGTGTATTAGACTTAACAACAGAAGAATTGGAAGCCATAAAGCATCAACTC | ||
| AACCCCAAAGAAGATGACGTAGAGCTTTAAGTTAACAAAAAATACGGGGCAAATAAGTCAACATGGAGAA | ||
| GTTTGCACCTGAATTTCATGGAGAAGACGCAAATAACAAAGCTACCAAATTCCTAGAATCAATAAAAGGC | ||
| AAGTTCGCATCATCCAAAGATCCTAAGAAGAAAGATAGCATAATATCTGTCAACTCAATAGACATAGAAG | ||
| TCACTAAAGAGAGCCCGATAACATCTGGCACCAACATTATCAATCCAACAAGTGAAGCCGACAGTACCCC | ||
| AGAAACTAAAGCCAACTACCCAAGAAAACCTCTAGTAAGCTTCAAAGAAGATCTCACCCCAAGTGATAAC | ||
| CCTTTCTCTAAGTTGTACAAAGAAACCATAGAAACATTTGATAACAATGAAGAAGAATCTAGCTACTCAT | ||
| ATGAGGAGATCAATGACCAAACAAATGACAACATTACAGCAAGACTAGATAGAATTGATGAAAAATTAAG | ||
| TGAAATATTAGGAATGCTCCATACATTAGTAGTTGCAAGTGCAGGACCTACTTCGGCTCGTGACGGAATA | ||
| AGAGATGCTATGGTTGGTCTAAGAGAAGAAATGATAGAAAAAATAAGAGCAGAAGCATTAATGACCAATG | ||
| ATAGGTTAGAGGCCATGGCAAGACTTAGGAATGAGGAAAGTGAAAAAATGGCAAAAGACACCTCAGATGA | ||
| AGTGTCTCTCAATCCAACCTCTAAAAAATTGAGTGACTTGTTGGAAGACAACGATAGCGACAATGATCTA | ||
| TCACTTGATGATTTTTGATCAGTGATCAACTCACTCAGCAATCAACAACATCAATAAAACAGACACCAAT | ||
| CCATTGAATCAATTGCCAGACTGAAAAAACAAACATCCATCAGCAGAACCACCAACCAATCAATCAACCA | ||
| ATTGATCAATCAGCACCCTGACAAAATTAACAATATAGTAACAAAAAAAGAACAAGATGGGGCAAATATG | ||
| GAAACATACGTGAACAAGCTTCACGAAGGCTCCACATACACAGCAGCTGTCCAGTACAATGTTCTAGAAA | ||
| AAGATGATGATCCCGCATCACTAACAATATGGGTGCCTATGTTCCAGTCATCTGTGCCAGCAGACTTGCT | ||
| CATAAAAGAACTTGCAAGCATCAACATACTAGTAAAGCAGATCTCTACGCCCAAAGGACCTTCACTACGA | ||
| GTCACGATCAACTCAAGAAGTGCTGTGCTGGCTCAAATGCCTAGTAATTTCACCATAAGTGCAAATGTAT | ||
| CATTAGATGAAAGAAGCAAATTAGCATATGATGTAACTACACCTTGTGAAATCAAAGCATGCAGTTTAAC | ||
| ATGCTTAAAAGTAAAAAGTATGTTAACTACAGTCAAAGATCTAACCATGAAGACATTCAACCCCACTCAT | ||
| GAGATCATTGCTCTATGTGAATTTGAAAATATTATGACATCAAAAAGAGTAATAATACCAACCTATCTAA | ||
| GATCAATCAGTGTCAAAAACAAAGATCTGAACTCACTGGAAAATATAGCAACCACCGAATTCAAAAATGC | ||
| TATCACCAATGCTAAAATTATTCCCTATGCAGGATTAGTGTTAGTTATCACGGTTACTGATAATAAAGGA | ||
| GCATTCAAGTATATCAAGCCACAGAGTCAATTTATAGTGGATCTTGGTGCCTACCTAGAAAAAGAGAGCA | ||
| TATATTATGTGACTACTAATTGGAAGCATACAGCTACACGTTTTTCAATCAAACCACTAGAGGATTAAAC | ||
| TCAATTATCAACATTGAATGACAGGTTCACATATATCCTCAACTGCACACTATATCTAAACATCATAAAC | ||
| ATCTACACTACACACTTCATCACACAAACCAATCCCACTCAAAATCTAAAATCACTTCCAGCCATTGTCT | ||
| GCCAGACCTAGAGTGCGAATAGGTAAATAAAACAAGAATATGGGGTAAATAGATATCAGTTAGAGTTCAA | ||
| CCAATCTCAACAACCATCTATACCGCCAATCCAATACATACATTGCAAATCTTAAAATGGGAAACACATC | ||
| CATCACAATAGAATTCACAAGCAAATTTTGGCCCTATTTTACACTAATACATATGATCTTAACTCTAATC | ||
| TCTTTACTAATTATAATCACTATTATGATTGCAATACTAAATAAGCTAAGTGAACATAAAATATTCTGCA | ||
| ACAAAACTCTTGAACAAGGACAGATGTATCAAATCGACACATAGTGTTCTCCCATTATGCTGTATCAAAT | ||
| CACAATCCTGTGTATATAAATAAACAAATCCAATCTTCTCACAGAGTCATGGCATCACAAAACCATGCCA | ||
| ACCATCATGGTAGCATAGAGTAGTTATTAAAAATTAACATAATGATGAATTATTAGTATGGGATCAAAAA | ||
| CAACATTGGGGCAAATGCAACAATGTCCAAAAACAAGAATCAACGCACTGCCAGGACTCTAGAAAAGACC | ||
| TGGGATACTCTTAATCATCTAATTGTAATATCCTCTTGTTTATACAAATTAAATTTAAAATCTATAGCAC | ||
| AAATAGCACTATCAGTTTTGGCAATGATAATCTCAACCTCTCTTATAATTGCAGCCATAATATTCATCAT | ||
| CTCTGCCAATCACAAAGTTACACTAACAACTGTCACAGTTCAAACAATAAAAAACCACACTGAGAAAAAC | ||
| ATAACCACTTACCTCACTCAAGTCTCACCAGAAAGGGTTAGCCCATCCAAACAACCCACAGCCACACCAC | ||
| CAATCCACACAAACTCAGCCACAATATCACCCAATACAAAATCAGAAACACACCATACAACAACACAAAC | ||
| CAAAGGCACAATCTCTACTCCAACACAGAACAACAAGCCAAGCACAAAACCACGTCCAAAAAATCCACCA | ||
| AAAAAAGATGATTACCATTTTGAAGTGTTCAACTTTGTTCCCTGTAGTATATGTGGCAACAATCAACTCT | ||
| GCAAATCCATTTGCAAAACAATACCAAGCAATAAACCAAAGAAAAAACCAACTACAAAACCCACAAACAA | ||
| ACCACCTACCAAAACCACAAACAAAAGAGACCCCAAAACACTAGCCAAAACACCGAAAAAAGAAACCACC | ||
| ATTAACCCAACAAAAAAACCAACCCCCAAGACTACAGAAAGAGACACCAGCACCCCACAATCCACTGTGC | ||
| TCGACATAACCACATCAAAACACACAGAAAGGGACACCAGCACCTCACAATCCATTGCGCTTGACACAAC | ||
| CACATCAAAACACACAACCCAACAGCAATCTCTCTACTCAACCATCCCCGAAAACACACCCAACTCCACA | ||
| CAAACACCCACAGCATCCGAGCCCTCCACATCAAATTCTATCTAAAGACTCCAGTCATATGCTTAGTTAT | ||
| TTAAAAACTACATCTTAGCAAAGAACCGTGATCCCTCAAGCAAGAACGAAATTAAATCTGGGGCAAATAA | ||
| CCATGGAGTTGCTGATCCATAGATCAAGTGCAATCTTCCTAACTCTTGCTATTAATGCATTGTACCTTAC | ||
| CTCAAGTCAGAACATAACTGAGGAGTTTTACCAATCAACATGTAGTGCAGTTAGCAGAGGTTACTTGAGT | ||
| GCTTTAAGAACAGGTTGGTATACCAGTGTCATAACAATAGAATTAAGTAATATAAAAGAAACCAAATGCA | ||
| ATGGAACTGACACTAAAGTTAAACTTATAAAACAAGAATTAGATAAGTATAAGAATGCAGTAACTGAATT | ||
| ACAGTTACTTATGCAAAACACACCAGCTGTCAACAACCGGGCCAGAAGAGAAGCACCACAGTATATGAAC | ||
| TACACAATCAATACCACTAAAAACCTAAATGTATCAATAAGCAAGAAGAGGAAACGAAGATTTCTGGGCT | ||
| TCTTGTTAGGTGTAGGATCTGCAATAGCAAGTGGTATAGCTGTATCCAAAGTTCTACACCTTGAAGGAGA | ||
| AGTGAACAAGATCAAAAATGCTTTGCAGCTTACAAACAAAGCTGTAGTCAGTCTATCAAATGGGGTCAGT | ||
| GTTTTAACCAGCAGAGTGTTAGATCTCAAGAATTATATAAACAACCAATTATTACCTATGGTAAATCGAC | ||
| AGAGTTGTCGCATATCCAACATTGAGACAGTTATAGAATTCCAGCAGAAGAACAGCAGATTGTTGGAAAT | ||
| CACCAGAGAATTTAGTGTCAATGCAGGTGTAACGACACCTTTAAGCACTTACATGTTAACAAACAGTGAG | ||
| TTACTATCATTAATCAATGATATGCCTATAACAAATGATCAGAAAAAATTAATGTCAAGCAATGTTCAGA | ||
| TAGTAAGGCAACAAAGTTATTCTATCATGTCTATAATAAAGGAAGAAGTTCTTGCATATGTTGTACAGCT | ||
| ACCTATCTATGGTGTAATTGATACACCTTGCTGGAAATTACACACATCACCTCTGTGCACCACCAACATC | ||
| AAAGAAGGATCAAATATTTGTTTAACAAGGACTGATAGAGGATGGTATTGTGATAATGCAGGATCAGTAT | ||
| CCTTCTTTCCACAAGCTGACACTTGTAAAGTACAGTCCAATCGAGTATTTTGTGACACTATGAACAGTTT | ||
| GACATTACCAAGTGAAGTCAGCCTTTGTAACACTGACATATTCAATTCCAAGTATGACTGCAAAATTATG | ||
| ACATCAAAAACAGACATAAGCAGCTCAGTAATTACTTCTCTAGGAGCTATAGTGTCATGCTATGGTAAGA | ||
| CTAAATGTACTGCATCCAACAAAAATCGTGGAATTATAAAGACATTTTCTAATGGTTGTGATTATGTGTC | ||
| AAACAAAGGAGTAGATACTGTATCAGTGGGCAACACTCTATATTATGTCAACAAGCTGGAAGGCAAAAAC | ||
| CTTTATGTAAAAGGGGAACCTATAATAAATTACTATGACCCTCTAGTGTTTCCTTCTGATGAGTTTGATG | ||
| CATCAATATCTCAAGTCAATGAAAAAATTAATCAAAGTTTAGCTTTTATTCGTAGATCTGATGAATTATT | ||
| ACATAATGTAAATACTGGAAAATCTACTACAAATATTATGATAACTGCAATTATTATAGTAATCATTGTA | ||
| GTATTGTTATCATTAATAGCTATTGGTTTACTGTTGTATTGCAAAGCCAAAAACACACCAGTTACATTAA | ||
| GCAAAGACCAACTAAGTGGAATCAATAATATTGCATTCAGCAAATAGACAAAAAACCACCTGATCATGTT | ||
| CCAACAACAATCTGCTGACCATCAATCCCAAATCAACTTACAACAGATACTTCAACATCACAGCACAGGC | ||
| TGAATCATCTCCTCGCATCATGCTACCCACACAACTAAGCTAGATCCTTAATTCATAGTTACATAAAAGC | ||
| CTCAAATATCGCAATCAACACTAAATCAACACATCATTCACAAAACTAACAGCTGGGGCAAATATGTCGC | ||
| GAAGAAATCCCTGCAAATTTGAGATTAGAGGTCATTGCTTGAATGGTAGAAGATGCCACTACAGTCATAA | ||
| TTACTTTGAATGGCCTCCTCATGCATTGCTAGTGAGGCAAAACTTCATGTTAAACAAGATACTCAAGTCA | ||
| ATGGACAAGAGCATAGACACTTTGTCTGAAATAAGTGGAGCTGCTGAACTTGATAGAACAGAAGAATATG | ||
| CTCTTGGTATAGTTGGAGTGCTAGAGAGTTACATAGGATCTATAAACAACATAACAAAACAATCAGCATG | ||
| TGTTGCTATGAGTAAACTTCTTATTGAGATCAATAGTGATGACATTAAAAAGCTGAGAGATAATGAAGAA | ||
| CCCAATTCACCTAAGATAAGAGTGTACAATACTGTTATATCATACATCGAGAGCAATAGAAAAAACAGCA | ||
| AGCAAACCATCCATCTGCTTAAACGATTACCAGCAGACGTGCTGAAGAAGACAATAAAGAACACATTAGA | ||
| TATCCACAAAAGCATAACCATAAGCAACCCAAAAGAGTCAACCATAAGTGATCAAAATGACCAAACCAAA | ||
| AATAATGATATTACCGGATAAATATCCTTGTAGTATATCATCCATATTGATCTCAAGTGAAAGCATGATT | ||
| GCTACATTCAATCATAAAGACATATTACAATTTAACCACAACCATTTAGATAACCACCAGTGTTTATTAA | ||
| ATCATATATTTGATGAAATTCATTGGACACCTAAAAACTTATTAGATGCCACTCAACAATTTCTCCAACA | ||
| TCTTAACATCCCTGAAGATATATATACAGTATATATATTAGTGTCATAATGCTTGATCATAGCGACTCTA | ||
| TATCATCCAACCATAAATTAGTCTTAATAAAGTTATGGGACAAAATGGATCCCATTATTAATGGAAGCTC | ||
| CGCTAATGTATATCTAACTGATAGTTATCTAAAAGGTGTTATCTCTTTTTCAGAATGTAATGCTTTAGGG | ||
| AGTTACCTTTTTAACGGCCCTTATCTTAAAAATGATTATACCAACTTAATTAGTAGACAAAGCCCACTAA | ||
| TAGAGCATATGAATCTAAAAAAACTAACTATAACACAGTCATTAATATCTAGATACCATAAAGGCGAACT | ||
| GAAATTAGAAGAACCAACTTATTTCCAGTCATTACTTATGACATATAAAAGCATGTCCTCGTCTGAACAA | ||
| ATTGCTACAACTAACTTACTTAAAAAAATAATACGAAGAGCTATAGAAATAAGTGATGTAAAGGTGTACG | ||
| CCATCTTGAATAAACTAGGACTAAAGGAAAAGGACAGAGTTAAGCCCAACAACAATTCAGGTGATGAAAA | ||
| CTCAGTACTTACAACCATAATTAAAGATGATATACTCTCAGCTGTGGAAAACAATCAATCATATACAAAT | ||
| TCAGATAAAAATTACTCAGTAAATCAAAATATCAATATCAAAACAACACTCTTAAAAAAGTTGATGTGTT | ||
| CAATGCAACATCCTCCATCATGGTTAATACACTGGTTCAATTTATATACAAAATTAAATAACATATTAAC | ||
| ACAATATCGATCAAATGAGGTAAAAAGTCATGGGTTTATATTAATAGATAATCAAACTTTGAGTGGTTTT | ||
| CAGTTTATTTTAAATCAATATGGTTGCATTGTTTATCATAAAGGGCTCAAAAAAATTACAACTACTACAT | ||
| ACAATCAATTTTTGACATGGAAAGACATCAGCCTCAGCAGATTAAATGTTTGCTTAATTACTTGGATAAG | ||
| TAATTGTTTAAATACATTAAATAAAAGCTTAGGGTTGAGATGCGGATTCAATAATGTTGTGCTATCACAA | ||
| TTATTCCTTTACGGAGATTGTATACTGAAATTATTTCATAATGAAGGATTTTACATAATAAAAGAAGTAG | ||
| AAGGATTTATTATGTCTTTAATTCTAAACATAACAGAAGAAGATCAATTTAGGAAACGATTTTATAATAG | ||
| CATGCTAAATAACATCACAGATGCAGCTATTAAGGCTCAAAAGGATCTACTATCAAGAGTATGTCACACT | ||
| TTATTAGACAAGACAGTGTCTGATAATATCATAAATGGTAAATGGATAATTCTATTAAGTAAATTTCTTA | ||
| AATTGATTAAGCTTGCAGGTGATAATAATCTCAATAACTTGAGTGAGCTATATTTTCTCTTCAGAATCTT | ||
| TGGACATCCAATGGTTGATGAAAGACAAGCAATGGATGCTGTAAGAATTAACTGCAATGAAACTAAGTTC | ||
| TATTTATTAAGTAGCCTAAGTACGTTGAGAGGTGCTTTCATTTATAGAATCATAAAAGGGTTTGTAAATA | ||
| CCTACAATAGATGGCCCACTTTAAGGAATGCTATTGTCCTACCTCTAAGATGGTTAAACTATTATAAACT | ||
| TAATACTTATCCATCTCTACTTGAAATCACAGAAAATGATTTGATTATTTTATCAGGATTGCGGTTCTAT | ||
| CGTGAGTTTCATCTGCCTAAAAAAGTGGATCTTGAAATGATAATAAATGACAAAGCTATTTCTCCTCCAA | ||
| AAGATCTAATATGGACTAGTTTTCCTAGAAATTACATGCCATCACATATACAAAATTATATAGAACATGA | ||
| AAAGTTGAAGTTCTCTGAAAGCGACAGATCAAGAAGAGTACTAGAGTATTACTTGAGAGATAATAAATTC | ||
| AATGAATGTGATCTATACAATTGTGTAGTTAATCAAAGCTATCTCAACAACTCTAATCATGTGGTATCAC | ||
| TAACTGGTAAAGAAAGAGAGCTCAGTGTGGGTAGAATGTTTGCTATGCAACCAGGTATGTTTAGGCAAAT | ||
| CCAAATCTTAGCAGAAAAAATGATAGCTGAAAATATTTTACAATTCTTCCCTGAGAGTTTGACAAGATAT | ||
| GGTGATCTAGAGCTTCAAAAGATATTAGAATTAAAAGCAGGAATAAGCAACAAGTCAAATCGTTATAATG | ||
| ATAACTACAACAATTATATCAGTAAATGTTCTATAATAACAGATCTTAGCAAATTTAATCAAGCATTTAG | ||
| ATATGAAACATCATGTGTCTGCAGTGATGTATTAGATGAACTGCATGGGGTACAATCTCTATTCTCTTGG | ||
| TTGCATTTAACAATACCTCTTGTCACAATAATATGTACATATAGACATGCACCTCCTTTTATAAAGGATC | ||
| ATGTTGTCAATCTTAATGAAGTTGATGAACAAAGTGGGTTATACAGATATCATATGGGTGGTATTGAGGG | ||
| CTGGTGTCAAAAACTGTGGACCATTGAAGCCATATCATTATTAGATCTAATATCTCTTAAAGGTAAATTC | ||
| TCCATCACAGCTCTGATAAATGGTGATAATCAGTCAATTGATATAAGTAAACCAGTTAGACTTATAGAGG | ||
| GTCAGACCCATGCTCAAGCAGATTATTTGTTAGCATTAAATAGCCTTAAGTTGCTATATAAAGAGTATGC | ||
| AGGCATAGGCCATAAGCTTAAGGGAACCGAGACCTATATATCTCGAGATATGCAGTTCATGAGCAAAACA | ||
| ATCCAGCACAATGGAGTGTACTATCCAGCCAGTATCAAAAAAGTCCTGAGAGTAGGTCCATGGATAAATA | ||
| CAATACTTGATGATTTTAAAGTTAGTTTAGAATCTATAGGTAGCTTAACACAGGAGTTAGAATACAGAGG | ||
| AGAAAGCTTATTATGCAGTTTAATATTTAGGAATATTTGGTTATACAATCAAATTGCTCTGCAACTCCGG | ||
| AATCATGCTTTATGTAATAATAAGCTATATTTAGATATATTGAAAGTATTAAAACACTTAAAAACCTTTT | ||
| TTAATCTTGATAGTATCGATACGGCATTATCATTGTATATGAACTTGCCTATGCTGTTTGGTGGTGGTGA | ||
| TCCTAATTTGTTATATCGAAGCTTTTATAGGAGAACTCCAGACTTCCTTACAGAAGCTATAGTACATTCA | ||
| GTGTTTGTGTTGAGCTATTATACTGGTCACGATCTACAAGATAAGCTCCAGGATCTTCCAGATGATAGAC | ||
| TGAACAAATTCTTGACTTGTGTCATCACATTTGATAAAAATCCAAATGCCGAGTTTGTAACATTGATGAG | ||
| GGATCCACAGGCTTTAGGGTCTGAAAGGCAAGCTAAAATTACTAGTGAGATTAATAGATTAGCAGTAACA | ||
| GAAGTCTTAAGTATAGCTCCAAACAAAATATTTTCTAAAAGTGCGCAACACTATACTACCACTGAGATTG | ||
| ATCTAAATGACATTATGCAAAATATAGAACCAACTTACCCTCATGGATTAAGAGTTGTTTATGAAAGTTT | ||
| ACCTTTTTATAAAGCAGAAAAAATAGTTAATCTTATATCAGGAACAAAATCCATAACTAATATACTTGAA | ||
| AAAACATCAGCGATAGATACAACTGATATTAATAGGGCTACTGATATGATGAGGAAAAATATAACCTTAC | ||
| TTATAAGGATACTTCCACTAGATTGTAACAAAGACAAAAGAGAGTTATTAAGTTTAGAAAATCTTAGCAT | ||
| AACTGAATTAAGCAAGTATGTAAGAGAAAGATCTTGGTCATTATCCAATATAGTAGGAGTAACATCACCA | ||
| AGTATTATGTTCACAATGGACATTAAATATACAACTAGCACTATAGCCAGTGGTATAATTATAGAAAAAT | ||
| ATAATGTTAATGGTTTAACTCGTGGTGAAAGAGGACCTACTAAGCCATGGGTAGGTTCATCTACACAAGA | ||
| GAAAAAAACAATGCCAGTGTACAATAGACAAGTTTTAACCAAAAAGCAAAGAGACCAAATAGATTTATTA | ||
| GCAAAATTAGACTGGGTATATGCATCCATAGACAACAAAGATGAATTCATGGAAGAACTGAGTACTGGAA | ||
| CACTTGGACTGTCATATGAAAAGGCCAAAAAGTTGTTTCCACAATATCTAAGTGTCAATTATTTACACCG | ||
| GTTAACAGTCAGTAGTAGACCATGCGAATTCCCTGCCTCAATACCAGCTTATAGAACAACAAATTATCAT | ||
| TTTGATACTAGTCCTATCAATCATGTATTAACAGAAAAGTATGGAGATGAAGATATCGACATTGTGTTTC | ||
| AAAATTGCATAAGTTTTGGTCTTAGCTTGATGTCAGTTGTGGAACAATTCACAAACATATGTCCTAATAG | ||
| AATTATTCTCATACCGAAGCTGAATGAGATACATTTGATGAAACCTCCTATATTTACAGGAGATGTTGAT | ||
| ATCATCAAGTTGAAGCAAGTGATACAAAAACAGCATATGTTCCTACCAGATAAAATAAGTTTAACCCAAT | ||
| ATGTAGAATTATTCTTAAGTAACAAAGCACTTAAATCTGGATCTCACATCAACTCTAATTTAATATTAGC | ||
| ACATAAAATGTCTGATTATTTTCATAATGCGTATATTTTAAGTACTAATTTAGCTGGACATTGGATTCTG | ||
| ATTATTCAACTTATGAAAGATTCAAAAGGTATTTTTGAAAAAGATTGGGGAGAGGGGTATATAACTGATC | ||
| ATATGTTCATTAATTTGAATGTTTTCTTTAATGCTTATAAGACTTATTTGCTATGTTTTCATAGAGGTTA | ||
| TGGTAAAGCAAAATTAGAATGTGATATGAACACTTCAGATCTTCTTTGTGTTTTGGAGTTAATAGACTGT | ||
| AGCTACTGGAAATCTATGTCTAAAGTTTTCCTAGAACAAAAAGTCATAAAATACATAGTCAATCAAGACA | ||
| CAAGTTTGCATAGAATAAAAGGTTGTCACAGTTTTAAGTTGTGGTTTTTAAAACGCCTTAATAATGCTAA | ||
| ATTTACCGTATGCCCTTGGGTTGTTAACATAGATTATCACCCAACACACATGAAAGCTATATTATCTTAC | ||
| ATAGATTTAGTTAGAATGGGGTTAATAAATGTAGATAAATTAACCATTAAAAATAAAAACAAATTCAATG | ||
| ATGAATTTTACACATCAAATCTCTTTTACATTAGTTACAACTTTTCAGACAACACTCATCTGCTAACAAA | ||
| ACAAATAAGGATTGCTAATTCAGAATTAGAAGATAATTATAACAAACTATATCACCCAACCCCAGAAGCT | ||
| TTAGAAAATGTATCATTAATCCCTGTTAAAAGTAATAATAGAAACAAACCTAAATTTTGTATAAGTGGAA | ||
| GTACTGAATCTATGATGACGTCAACATTCTCTAATAAAATGCATATTAAATCTTCCACTGTTACCACAAG | ||
| ATTCAATTATAGCAGACAAGACTTGTACAATTTATTTCCAATTGTTGTGATAGACAGGATTATAGATCAT | ||
| TCAGGTAATACAGAAAAATCTAACCAACTTTACACCACCACTTCACATCAGACATCTTTAGTAAGGAACA | ||
| GTGCATCACTTTATTGCATGCTTCCTTGGCATCATGTCAATAGATTTAACTTTGTATTTAGTTCCACAGG | ||
| ATGCAAGATCAGTATAGAATATATTTTAAAAGATCTTAAGATTAAAGATCCCAGTTGCATAGCATTCATA | ||
| GGTGAAGGAGCTGGTAACTTATTATTACGTACGGTAGTAGAACTTCATCCTGACATAAGATATATTTACA | ||
| GAAGTTTAAAAGATTGCAATGATCATAGTTTACCTATTGAATTTCTAAGGTTATACAACGGGCATATAAA | ||
| CATAGATTATGGTGAGAATTTAACCATTCCTGCTACAGATGCAACTAACAACATACATTGGTCTTATTTA | ||
| CACATAAAATTTGCAGAACCTATTAGTATCTTTGTCTGTGATGCTGAATTACCTGTCACAGCCAATTGGA | ||
| GTAAGATCATAATTGAATGGAGTAAGCATGTAAGAAAGTGCAAATACTGTTCTTCTGTAAATAGATGCAT | ||
| TTTAATTGCAAAATACCATGCTCAAGATGATATTGATTTCAAATTAGATAACATTACTATATTAAAAACT | ||
| TATGTGTGCCTAGGTAGCAAGTTAAAAGGATCTGAAGTTTACTTAGTCCTTACAATAGGCCCTGCAAATA | ||
| TACTTCCTGTTTTTGATGTTGTGCAAAATGCTAAATTGATTCTTTCAAGAACTAAAAATTTCATTATGCC | ||
| TAAAAAGATTGACAAGGAATCTATCGATGCAAATATTAAAAGCTTAATACCTTTCCTTTGTTACCCTATA | ||
| ACAAAAAATGGAATTAAGACTTCATTGTCAAAATTGAAGAGTGTAGTTAATGGAGATATATTATCATATT | ||
| CTATAGCTGGACGTAATGAAGTATTCAGCAACAAGCTTATAAACCACAAGCATATGAATATCTTAAAATG | ||
| GCTGGATCATGTTTTAAACTTTAGATCAGCTGAACTTAATTACAATCATTTATACATGATAGAGTCCACA | ||
| TATCCTTACTTGAGTGAATTATTAAATAGTTTAACAACCAATGAGCTCAAGAAGCTGATTAAAATAACAG | ||
| GTAGTGTACTATACAACCTTCCTAATGAACAGTAACTTAAAATATCATTAACAAGTTTGGTCAAATTTAG | ||
| ATGCTAACACATTATTATATTATAGTTATTAAAAAATATGCAAACTTTTCAATAATTTAGCATATTGATT | ||
| CCAAAATTATCATTTTAGTCTTAAGGGATTAAATAAAAGTCTAAAACTAACAATCACACATGTGCATTTA | ||
| CAACACAACGAGACATTAGTTTTTGACACTTTTTTTCTCGTGGCCGGCATG | ||
|
|
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,51 @@ | ||
| MT107528.1 141 519 scheme_INSERT_1 pool1 + | ||
| MT107528.1 434 813 scheme_INSERT_2 pool2 + | ||
| MT107528.1 763 1147 scheme_INSERT_3 pool1 + | ||
| MT107528.1 1022 1385 scheme_INSERT_4 pool2 + | ||
| MT107528.1 1335 1713 scheme_INSERT_5 pool1 + | ||
| MT107528.1 1666 2046 scheme_INSERT_6 pool2 + | ||
| MT107528.1 1995 2370 scheme_INSERT_7 pool1 + | ||
| MT107528.1 2257 2628 scheme_INSERT_8 pool2 + | ||
| MT107528.1 2580 2941 scheme_INSERT_9 pool1 + | ||
| MT107528.1 2758 3136 scheme_INSERT_10 pool2 + | ||
| MT107528.1 3085 3467 scheme_INSERT_11 pool1 + | ||
| MT107528.1 3420 3803 scheme_INSERT_12 pool2 + | ||
| MT107528.1 3695 4067 scheme_INSERT_13 pool1 + | ||
| MT107528.1 3981 4358 scheme_INSERT_14 pool2 + | ||
| MT107528.1 4144 4515 scheme_INSERT_15 pool1 + | ||
| MT107528.1 4483 4862 scheme_INSERT_16 pool2 + | ||
| MT107528.1 4847 5214 scheme_INSERT_17 pool1 + | ||
| MT107528.1 5136 5459 scheme_INSERT_18 pool2 + | ||
| MT107528.1 5466 5848 scheme_INSERT_19 pool1 + | ||
| MT107528.1 5819 6204 scheme_INSERT_20 pool2 + | ||
| MT107528.1 6046 6409 scheme_INSERT_21 pool1 + | ||
| MT107528.1 6326 6705 scheme_INSERT_22 pool2 + | ||
| MT107528.1 6553 6934 scheme_INSERT_23 pool1 + | ||
| MT107528.1 6894 7259 scheme_INSERT_24 pool2 + | ||
| MT107528.1 7068 7433 scheme_INSERT_25 pool1 + | ||
| MT107528.1 7393 7775 scheme_INSERT_26 pool2 + | ||
| MT107528.1 7721 8114 scheme_INSERT_27 pool1 + | ||
| MT107528.1 7918 8284 scheme_INSERT_28 pool2 + | ||
| MT107528.1 8257 8622 scheme_INSERT_29 pool1 + | ||
| MT107528.1 8500 8869 scheme_INSERT_30 pool2 + | ||
| MT107528.1 8814 9183 scheme_INSERT_31 pool1 + | ||
| MT107528.1 9087 9476 scheme_INSERT_32 pool2 + | ||
| MT107528.1 9421 9808 scheme_INSERT_33 pool1 + | ||
| MT107528.1 9768 10135 scheme_INSERT_34 pool2 + | ||
| MT107528.1 10080 10451 scheme_INSERT_35 pool1 + | ||
| MT107528.1 10409 10777 scheme_INSERT_36 pool2 + | ||
| MT107528.1 10728 11101 scheme_INSERT_37 pool1 + | ||
| MT107528.1 11031 11405 scheme_INSERT_38 pool2 + | ||
| MT107528.1 11361 11730 scheme_INSERT_39 pool1 + | ||
| MT107528.1 11555 11936 scheme_INSERT_40 pool2 + | ||
| MT107528.1 11893 12262 scheme_INSERT_41 pool1 + | ||
| MT107528.1 12218 12603 scheme_INSERT_42 pool2 + | ||
| MT107528.1 12539 12920 scheme_INSERT_43 pool1 + | ||
| MT107528.1 12871 13256 scheme_INSERT_44 pool2 + | ||
| MT107528.1 13240 13616 scheme_INSERT_45 pool1 + | ||
| MT107528.1 13458 13829 scheme_INSERT_46 pool2 + | ||
| MT107528.1 13671 14059 scheme_INSERT_47 pool1 + | ||
| MT107528.1 14018 14399 scheme_INSERT_48 pool2 + | ||
| MT107528.1 14324 14705 scheme_INSERT_49 pool1 + | ||
| MT107528.1 14640 15029 scheme_INSERT_50 pool2 + | ||
| MT107528.1 14888 15236 scheme_INSERT_51 pool1 + |
Oops, something went wrong.