Fixes 'No space left on device' in Docker rules

- also added for tutorial as those might use real-world data
cbg-ethz · Oct 13, 2023 · 1764b53 · 1764b53
1 parent a6b7a33
commit 1764b53
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Showing 3 changed files with 26 additions and 3 deletions.
diff --git a/.github/workflows/deploy-docker.yaml b/.github/workflows/deploy-docker.yaml
@@ -23,6 +23,12 @@ jobs:
       packages: write
 
     steps:
+      - name: Free space
+        # HACK fixes 'No space left on device'
+        # see: https://github.com/orgs/community/discussions/25678#discussioncomment-5242449
+        # NOTE we don't use those, we run everything inside Docker, anyway
+        run: rm -rf /opt/hostedtoolcache
+
       - name: Set up QEMU
         uses: docker/setup-qemu-action@v3
 

diff --git a/.github/workflows/test-docker.yaml b/.github/workflows/test-docker.yaml
@@ -22,6 +22,12 @@ jobs:
       packages: write
 
     steps:
+      - name: Free space
+        # HACK fixes 'No space left on device'
+        # see: https://github.com/orgs/community/discussions/25678#discussioncomment-5242449
+        # NOTE we don't use those, we run everything inside Docker, anyway
+        run: rm -rf /opt/hostedtoolcache
+
       - name: Set up QEMU
         uses: docker/setup-qemu-action@v3
 
@@ -41,11 +47,11 @@ jobs:
           push: false
           tags: ${{ steps.meta.outputs.tags }}
           labels: ${{ steps.meta.outputs.labels }}
-          outputs: type=docker,dest=/tmp/vpipe-docker.tar
+          outputs: type=docker,dest=./vpipe-docker.tar.zst,compression=zstd,compression-level=6
 
       - name: Upload artifact
         uses: actions/upload-artifact@v3
         if: "( !contains(github.ref, 'master') && !startsWith(github.ref, 'refs/tags') )"
         with:
           name: vpipe-docker
-          path: /tmp/vpipe-docker.tar
+          path: ./vpipe-docker.tar.zst
diff --git a/.github/workflows/tutorials.yaml b/.github/workflows/tutorials.yaml
@@ -17,6 +17,12 @@ jobs:
         shell: bash -l {0}
 
     steps:
+      - name: Free space
+        # HACK fixes 'No space left on device'
+        # see: https://github.com/orgs/community/discussions/25678#discussioncomment-5242449
+        # NOTE we don't use those, we use conda for everything anyway
+        run: rm -rf /opt/hostedtoolcache
+
       - name: Checkout repository
         uses: actions/checkout@v3
         with:
@@ -31,7 +37,6 @@ jobs:
         with:
           miniforge-version: latest
           miniforge-variant: Mambaforge
-          python-version: "3.11"
           mamba-version: "*"
           channels: conda-forge,bioconda
           channel-priority: strict
@@ -81,6 +86,12 @@ jobs:
         shell: bash -l {0}
 
     steps:
+      - name: Free space
+        # HACK fixes 'No space left on device'
+        # see: https://github.com/orgs/community/discussions/25678#discussioncomment-5242449
+        # NOTE we don't use those, we use conda for everything anyway
+        run: rm -rf /opt/hostedtoolcache
+
       - name: Checkout repository
         uses: actions/checkout@v3
         with: