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JohannesGawron committed Jul 18, 2024
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Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions CTC_SCITE/README.md
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**CTC-SCITE** is freely available under a GPL3 license at http:///CTC-SCITE
**CTC-SCITE** is freely available under a GPL3 license at http://CTC-SCITE


## Getting started
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make
```

Assuming the sample data file Br16.txt and annotation file Br16_samples_nodeDescription.tsv is located in the same folder, **CTC-SCITE** can then be executed as follows
./CTC-SCITE -i Br16.txt -samples Br16_samples_nodeDescription.tsv -r 1 -l 1000 -g 1 -e 0.1 -p 1 -o test
Assuming the sample data file Br16.txt and annotation file Br16_samples_nodeDescription.tsv is located in the same folder, **CTC-SCITE** can then be executed as follows:

```bash
./CTC-SCITE -i Br16.txt -samples Br16_samples_nodeDescription.tsv -r 1 -l 1000 -g 1 -e 0.1 -p 1 -o test
```

## Input Files
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