deps: update noodles-sam requirement from 0.51 to 0.52 #50
dependabot[bot]test.yml
on: pull_request
Formatting
13s
Linting
1m 47s
MSRV
15s
Matrix: Testing
Annotations
40 errors and 60 warnings
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MSRV
failed to select a version for `env_logger`.
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The process '/home/runner/.cargo/bin/cargo' failed with exit code 101
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Linting
Unable to create clippy annotations! Reason: HttpError: Resource not accessible by integration
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Exiting due to clippy errors
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Testing (beta):
src/extract.rs#L28
the trait bound `noodles_bam::io::Writer<noodles_bgzf::writer::Writer<Box<dyn std::io::Write>>>: noodles_sam::alignment::io::Write` is not satisfied
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Testing (beta):
src/extract.rs#L93
mismatched types
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Testing (beta):
src/extract.rs#L97
mismatched types
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Testing (beta):
src/extract.rs#L103
the trait bound `noodles_bam::Record: noodles_sam::alignment::Record` is not satisfied
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Testing (beta):
src/extract.rs#L103
mismatched types
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Testing (beta):
src/index.rs#L35
mismatched types
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Testing (beta):
src/index.rs#L47
mismatched types
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Testing (beta)
could not compile `rboss` (bin "rboss") due to 7 previous errors
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Testing (beta)
The process '/home/runner/.cargo/bin/cargo' failed with exit code 101
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Testing (stable):
src/extract.rs#L28
the trait bound `noodles_bam::io::Writer<noodles_bgzf::writer::Writer<Box<dyn std::io::Write>>>: noodles_sam::alignment::io::Write` is not satisfied
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Testing (stable):
src/extract.rs#L93
mismatched types
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Testing (stable):
src/extract.rs#L97
mismatched types
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Testing (stable):
src/extract.rs#L103
the trait bound `noodles_bam::Record: noodles_sam::alignment::Record` is not satisfied
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Testing (stable):
src/extract.rs#L103
mismatched types
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Testing (stable):
src/index.rs#L35
mismatched types
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Testing (stable):
src/index.rs#L47
mismatched types
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Testing (stable)
could not compile `rboss` (bin "rboss") due to 7 previous errors
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Testing (stable)
The process '/home/runner/.cargo/bin/cargo' failed with exit code 101
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Testing (windows):
src/extract.rs#L28
the trait bound `noodles_bam::io::Writer<noodles_bgzf::writer::Writer<Box<dyn std::io::Write>>>: noodles_sam::alignment::io::Write` is not satisfied
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Testing (windows):
src/extract.rs#L93
mismatched types
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Testing (windows):
src/extract.rs#L97
mismatched types
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Testing (windows):
src/extract.rs#L103
the trait bound `noodles_bam::Record: noodles_sam::alignment::Record` is not satisfied
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Testing (windows):
src/extract.rs#L103
mismatched types
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Testing (windows):
src/index.rs#L35
mismatched types
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Testing (windows):
src/index.rs#L47
mismatched types
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Testing (windows)
could not compile `rboss` (bin "rboss") due to 7 previous errors
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Testing (windows)
The process 'C:\Users\runneradmin\.cargo\bin\cargo.exe' failed with exit code 101
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Testing (macos):
src/extract.rs#L28
the trait bound `noodles_bam::io::Writer<noodles_bgzf::writer::Writer<Box<dyn std::io::Write>>>: noodles_sam::alignment::io::Write` is not satisfied
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Testing (macos):
src/extract.rs#L93
mismatched types
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Testing (macos):
src/extract.rs#L97
mismatched types
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Testing (macos):
src/extract.rs#L103
the trait bound `noodles_bam::Record: noodles_sam::alignment::Record` is not satisfied
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Testing (macos):
src/extract.rs#L103
mismatched types
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Testing (macos):
src/index.rs#L35
mismatched types
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Testing (macos):
src/index.rs#L47
mismatched types
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Testing (macos)
could not compile `rboss` (bin "rboss") due to 7 previous errors
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Testing (macos)
The process '/Users/runner/.cargo/bin/cargo' failed with exit code 101
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Formatting
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Testing (beta)
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Testing (beta)
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Testing (beta)
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Testing (stable)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Testing (stable)
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Testing (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Testing (stable)
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Testing (stable)
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Testing (stable)
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Testing (stable)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (windows)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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Testing (macos)
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