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black reformat
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njbernstein committed Jun 30, 2021
1 parent a4a6d28 commit 3aa7029
Showing 1 changed file with 12 additions and 5 deletions.
17 changes: 12 additions & 5 deletions solo/solo.py
Original file line number Diff line number Diff line change
Expand Up @@ -36,11 +36,18 @@
def main():
usage = "solo"
parser = ArgumentParser(usage, formatter_class=ArgumentDefaultsHelpFormatter)
parser.add_argument("-j", dest="model_json_file", help="json file to pass VAE parameters",
required='--version' not in sys.argv)
parser.add_argument("-d",
dest="data_path", help="path to h5ad, loom, or 10x mtx dir cell by genes counts",
required='--version' not in sys.argv)
parser.add_argument(
"-j",
dest="model_json_file",
help="json file to pass VAE parameters",
required="--version" not in sys.argv,
)
parser.add_argument(
"-d",
dest="data_path",
help="path to h5ad, loom, or 10x mtx dir cell by genes counts",
required="--version" not in sys.argv,
)
parser.add_argument(
"--set-reproducible-seed",
dest="reproducible_seed",
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