passing R CMD check locally

calico · Apr 22, 2024 · 5994d56 · 5994d56
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commit 5994d56
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Showing 4 changed files with 30 additions and 2 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -36,6 +36,7 @@ export(plot_heatmap)
 export(plot_univariate)
 export(plotsaverInput)
 export(plotsaverServer)
+export(reform_tidy_omic)
 export(remove_missing_values)
 export(shiny_filter_test)
 export(shiny_ggbiv_test)

diff --git a/R/data_classes.R b/R/data_classes.R
@@ -1026,7 +1026,7 @@ infer_tomic_table_type <- function(tomic, tomic_table) {
 #'
 #' @param tidy_data A tibble containing measurements along with sample metadata. This
 #'   table can be obtained as the "data" attribute from a romic "tidy_omic" object.
-#' @inheritParams romic::check_design
+#' @inheritParams check_design
 #'
 #' @details This is handy for passing data and metadata through approaches like parsnip
 #' which expect data to be formatted as a data.frame

diff --git a/man/reform_tidy_omic.Rd b/man/reform_tidy_omic.Rd
diff --git a/tests/testthat/test-dim_reduction.R b/tests/testthat/test-dim_reduction.R
@@ -40,5 +40,4 @@ test_that("Matrices keys are reconstructed with appropriate classes", {
     expect_s3_class(imputed_tomic, "triple_omic")
   }
 
-
 })
Original file line number	Diff line number	Diff line change
Expand Up		@@ -40,5 +40,4 @@ test_that("Matrices keys are reconstructed with appropriate classes", {
		expect_s3_class(imputed_tomic, "triple_omic")
		}


		})