Add a CadetDockerRunner and tests #153

	name: pipeline

	on:
	push:
	branches:
	- master
	- dev
	pull_request:

	jobs:
	test-job:
	runs-on: ubuntu-latest

	defaults:
	run:
	shell: bash -l {0}

	strategy:
	matrix:
	python-version: ["3.10", "3.11", "3.12"]
	steps:
	- uses: actions/checkout@v4

	- name: Get Date
	id: get-date
	run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT
	shell: bash

	- name: Setup Conda Environment
	uses: conda-incubator/setup-miniconda@v3
	with:
	miniforge-variant: Mambaforge
	use-mamba: true
	activate-environment: cadet-python
	channels: conda-forge,

	- name: Cache conda
	uses: actions/cache@v3
	env:
	# Increase this value to reset cache if environment.yml has not changed
	CACHE_NUMBER: 0
	with:
	path: ${{ env.CONDA }}/envs
	key: python_${{ matrix.python-version }}-${{ steps.get-date.outputs.today }}-${{ env.CACHE_NUMBER }}

	- name: Set up python env
	run: \|
	mamba install python==${{ matrix.python-version }}
	pip install .
	- name: Install pypa/build
	run: \|
	python -m pip install build --user

	- name: Build binary wheel and source tarball
	run: \|
	python -m build --sdist --wheel --outdir dist/ .

	- name: Test Wheel install and import
	run: \|
	python -c "import cadet; print(cadet.__version__)"
	cd ..
	- name: Test with pytest
	run: \|
	pip install .[testing]
	mamba install cadet -c conda-forge
	pytest tests --rootdir=tests -m "not slow and not local"

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