Skip to content

mm2-fast-v1.0pre1

Pre-release
Pre-release
Compare
Choose a tag to compare
@SaurabhKalikar SaurabhKalikar released this 08 Jun 06:39
mm2-fast-v1.0pre1
698bb1c

This is a pre-release version of mm2-fast compatible with minimap2 v2.22.

mm2-fast accelerates the 3 key modules of minimap2 as follows:

  • Accelerated seeding module using learned-index based hash table.
  • Accelerated dynamic programming based chaining module using AVX2/AVX512 vectorization.
  • Accelerated alignment module using AVX2/AVX512 vectorization.
Assets 4
Loading